RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PLOD1Q02809 727 aaPredicted RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 SBK1Q52WX2 424 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 TAS2R42Q7RTR8 314 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 LUZP2Q86TE4 346 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ZNF512BQ96KM6 892 aaPredicted RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 PAPOLBQ9NRJ5 636 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 SNUPNO95149 360 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 CSTF3Q12996 717 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 MTFR1Q15390 333 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 WASHC2DQ5SRD0 308 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 MDM1Q8TC05 714 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 RMDN1Q96DB5 314 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 GIMAP4Q9NUV9 329 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 IREB2P48200 963 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 ERFP50548 548 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF43-201ENST00000407977 TRMT5Q32P41 509 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 RBBP8NLQ8NC74 664 aaPredicted RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 PIGBQ92521 554 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ILKAPQ9H0C8 392 aaPredicted RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 HEY2Q9UBP5 337 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ZNF839A8K0R7 811 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 C5orf58C9J3I9 102 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 NFIBO00712 420 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 GLRA3O75311 464 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 USP1O94782 785 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 YWHABP31946 246 aaKnown RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 C12orf60Q5U649 245 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 FAM196AQ6ZSG2 479 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 SCN4BQ8IWT1 228 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 SLC30A5Q8TAD4 765 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 TMEM8AQ9HCN3 771 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 CD209Q9NNX6 404 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 SMARCAL1Q9NZC9 954 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
RNF43-201ENST00000407977 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
RNF43-201ENST00000407977 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 C4BPBP20851 252 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 NNMTP40261 264 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 BAG6P46379 1132 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 RAB14P61106 215 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 RBP3P10745 1247 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 PTPN4P29074 926 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
RNF43-201ENST00000407977 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 TMEM161AQ9NX61 479 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 BNIP3LO60238 219 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
RNF43-201ENST00000407977 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 IFNEQ86WN2 208 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 LRRC6Q86X45 466 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 FAM162AQ96A26 154 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SLC9A1P19634 815 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 PTK6Q13882 451 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 KCNV1Q6PIU1 500 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 ELMO2Q96JJ3 720 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 RHBDL2Q9NX52 303 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.54□□□□□ -0.24
RNF43-201ENST00000407977 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
RNF43-201ENST00000407977 LZTS3O60299 673 aaPredicted RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 CLPTM1O96005 669 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ADORA2BP29275 332 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RBP5P82980 135 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 TWF2Q6IBS0 349 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 ZFYVE16Q7Z3T8 1539 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 DCDC2Q9UHG0 476 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 LOC100653049A0A140TA62 436 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 KRT34O76011 436 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 BTKQ06187 659 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 NCOA3Q9Y6Q9 1424 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 EVPLLA8MZ36 301 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 TRIM49D1C9J1S8 452 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 F5H423 210 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms