RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PHBP35232 272 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 EPHB4P54760 987 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 MORC4Q8TE76 937 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ZNF512Q96ME7 567 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 RSAD1Q9HA92 442 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 KIF9Q9HAQ2 790 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 LCMT1Q9UIC8 334 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ESYT3A0FGR9 886 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ARIH2O95376 493 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 APOEP02649 317 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 TNFSF9P41273 254 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 DCAF6Q58WW2 860 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 LDLRAD1Q5T700 205 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 TAOK1Q7L7X3 1001 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 TTC13Q8NBP0 860 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 AFAP1L1Q8TED9 768 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 MED15Q96RN5 788 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 YME1L1Q96TA2 773 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 FMO2Q99518 471 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 DHX33Q9H6R0 707 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 MROH7Q68CQ1 1323 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 CCDC151A5D8V7 595 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 POC1B-GALNT4F8VUJ3 575 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 HOXA2O43364 376 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 AP1G2O75843 785 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ASGR1P07306 291 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 VIMP08670 466 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 VDRP11473 427 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 SLC12A2P55011 1212 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 NCKAP1LP55160 1127 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 CCL23P55773 120 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 ZBTB16Q05516 673 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ACAD10Q6JQN1 1059 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 RASAL3Q86YV0 1011 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 MSL3Q8N5Y2 521 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 MS4A14Q96JA4 679 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 ACO2Q99798 780 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 ITGA11Q9UKX5 1188 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 NFU1Q9UMS0 254 aa9.61□□□□□ -0.87
LIG4-202ENST00000405925 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
LIG4-202ENST00000405925 TREHO43280 583 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 ACAT1P24752 427 aaKnown RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 SLC1A1P43005 524 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 NOVP48745 357 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SULT1E1P49888 294 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 RAB27AP51159 221 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 MICALCLQ6ZW33 695 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 TBC1D31Q96DN5 1066 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 EPC1Q9H2F5 836 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 RABEP2Q9H5N1 569 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 XPNPEP1Q9NQW7 623 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 METTL5Q9NRN9 209 aaKnown RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 WRAP73Q9P2S5 460 aaPredicted RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 MAFBQ9Y5Q3 323 aaPredicted RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 CCDC88AQ3V6T2 1871 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SEPT4O43236 478 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 HMBSP08397 361 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 NFICP08651 508 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 RALAP11233 206 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 RRM1P23921 792 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 OAS2P29728 719 aaKnown RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 CD52P31358 61 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ITGA7Q13683 1181 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ZC3H18Q86VM9 953 aaKnown RBP9.6□□□□□ -0.87
LIG4-202ENST00000405925 SPATA4Q8NEY3 305 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 CYP3A43Q9HB55 503 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 TCHHQ07283 1943 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ANKRD36CQ5JPF3 1778 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ATICP31939 592 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SCNN1GP51170 649 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SP2Q02086 613 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 GCNT1Q02742 428 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 DRP2Q13474 957 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SMTNL2Q2TAL5 461 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SAPCD2Q86UD0 394 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 FEZF2Q8TBJ5 459 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SPON2Q9BUD6 331 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 TRIM62Q9BVG3 475 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 DONSONQ9NYP3 566 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
LIG4-202ENST00000405925 CPP00450 1065 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms