RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 WSCD1Q658N2 575 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 TPGS2Q68CL5 300 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 TCEAL8Q8IYN2 117 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 XXYLT1Q8NBI6 393 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 OR10T2Q8NGX3 314 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 RSAD2Q8WXG1 361 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 BORCS6Q96GS4 357 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 KIAA1586Q9HCI6 787 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 INTS13Q9NVM9 706 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 DNMT3BQ9UBC3 853 aaKnown RBP19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 AFF4Q9UHB7 1163 aaKnown RBP19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 SIX4Q9UIU6 781 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 MAPK8IP1Q9UQF2 711 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 INSL5Q9Y5Q6 135 aa19.59■□□□□ 0.73
PTPRN2-204ENST00000404321 EXOC3O60645 756 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 TNNC2P02585 160 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 CYP24A1Q07973 514 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 MTMR3Q13615 1198 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 PABPC1LQ4VXU2 614 aaKnown RBP19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 TRIM67Q6ZTA4 783 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 METTL23Q86XA0 190 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 FMR1NBQ8N0W7 255 aaPredicted RBP19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 CXorf38Q8TB03 319 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 ITFG1Q8TB96 612 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 ANKRD36BP1Q96IX9 119 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 ITGA11Q9UKX5 1188 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 SORCS3Q9UPU3 1222 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 C2orf16Q68DN1 1984 aa19.58■□□□□ 0.73
PTPRN2-204ENST00000404321 ARHGEF37A1IGU5 675 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 VNN2O95498 520 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 CYP11A1P05108 521 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 COL9A1P20849 921 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 PAX3P23760 479 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 PNPLA4P41247 253 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SNRPFP62306 86 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 RBP5P82980 135 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 TWF1Q12792 350 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 HFE2Q6ZVN8 426 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 ATAD1Q8NBU5 361 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 ING5Q8WYH8 240 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 CCDC47Q96A33 483 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 RTP3Q9BQQ7 232 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 CRISPLD1Q9H336 500 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 KCNK12Q9HB15 430 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 DSEQ9UL01 958 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SLC27A5Q9Y2P5 690 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 ANK1P16157 1881 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 TMEM221A6NGB7 291 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 PRR33A8MZF0 331 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 M0R296 226 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SOAT2O75908 522 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 RHOP08100 348 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 TNNI1P19237 187 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 CASP4P49662 377 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 DUSP4Q13115 394 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 GPR17Q13304 367 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 PNOCQ13519 176 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 PSMD6Q15008 389 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SURF1Q15526 300 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SLC39A12Q504Y0 691 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 WDR49Q8IV35 697 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 C12orf56Q8IXR9 622 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 GOLGA5Q8TBA6 731 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 FNBP1Q96RU3 617 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 CORO1BQ9BR76 489 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 OXCT2Q9BYC2 517 aaPredicted RBP19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 KCTD10Q9H3F6 313 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.57■□□□□ 0.728e-8■■■■■ 49.4
PTPRN2-204ENST00000404321 EPS15L1Q9UBC2 864 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 YIPF1Q9Y548 306 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 SNX9Q9Y5X1 595 aa19.57■□□□□ 0.72
PTPRN2-204ENST00000404321 LAMP2P13473 410 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 SIGLEC14Q08ET2 396 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 MYBPC2Q14324 1141 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 SLC5A9Q2M3M2 681 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 RTL10Q7L3V2 364 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 THEM5Q8N1Q8 247 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 PDCL2Q8N4E4 241 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 TTC9BQ8N6N2 239 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 LRRC52Q8N7C0 313 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 ERCC4Q92889 916 aaPredicted RBP19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 FGF13Q92913 245 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 CGRRF1Q99675 332 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 CDH7Q9ULB5 785 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 L1RE1Q9UN81 338 aa19.56■□□□□ 0.72
PTPRN2-204ENST00000404321 DENND4AQ7Z401 1863 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 MTMR11A4FU01 709 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 NR3C1P04150 777 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 POU2F2P09086 479 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 SNW1Q13573 536 aaKnown RBP19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 TRAPPC11Q7Z392 1133 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 SMYD4Q8IYR2 804 aaPredicted RBP19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 HS6ST3Q8IZP7 471 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 PLEKHO2Q8TD55 490 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 HPDLQ96IR7 371 aa19.55■□□□□ 0.72
PTPRN2-204ENST00000404321 ZCWPW1Q9H0M4 648 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms