RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PTPN21Q16825 1174 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 LIN9Q5TKA1 542 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 RESP18Q5W5W9 173 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 PDXDC1Q6P996 788 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CRELD2Q6UXH1 353 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 C15orf39Q6ZRI6 1047 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ANKS3Q6ZW76 656 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 GET4Q7L5D6 327 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CCDC65Q8IXS2 484 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 KCNG4Q8TDN1 519 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 LEO1Q8WVC0 666 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 RSAD2Q8WXG1 361 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 POMGNT1Q8WZA1 660 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 EDAQ92838 391 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SAAL1Q96ER3 474 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SUSD3Q96L08 255 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ACCSQ96QU6 501 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 MYADMQ96S97 322 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 CBWD1Q9BRT8 395 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 FAM213AQ9BRX8 229 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 TRIM9Q9C026 710 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 TNMDQ9H2S6 317 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 PLEKHA4Q9H4M7 779 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 PCIF1Q9H4Z3 704 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 OLFML3Q9NRN5 406 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZDHHC7Q9NXF8 308 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 SEL1LQ9UBV2 794 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 RCOR1Q9UKL0 485 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 UBQLN1Q9UMX0 589 aaKnown RBP6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 POLIQ9UNA4 740 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 NR2E1Q9Y466 385 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 STYXL1Q9Y6J8 313 aa6.26□□□□□ -1.41
HMGB1P20-201ENST00000402555 NOTCH4Q99466 2003 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 A0A1B0GVL5 298 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 WDR27A2RRH5 827 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 TMEM221A6NGB7 291 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 M0R296 226 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SYN3O14994 580 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 TBC1D4O60343 1298 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SEC24AO95486 1093 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 PDGFBP01127 241 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 OR4Q2P0C623 313 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 CYP3A5P20815 502 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SCP2P22307 547 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 HOXD13P35453 343 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 CUL4BQ13620 913 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 TMEM132DQ14C87 1099 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 KYAT1Q16773 422 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 CTXN3Q4LDR2 81 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 PPM1LQ5SGD2 360 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SPATA1Q5VX52 437 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 C9orf57Q5W0N0 161 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLFN12LQ6IEE8 588 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZNF280DQ6N043 979 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 ELMSAN1Q6PJG2 1045 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 DSTYKQ6XUX3 929 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 OTOP3Q7RTS5 596 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 GRASPQ7Z6J2 395 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 EFCAB13Q8IY85 973 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZDHHC14Q8IZN3 488 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 IQUBQ8NA54 791 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 BEST2Q8NFU1 509 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 HDAC7Q8WUI4 952 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 HVCN1Q96D96 273 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SPATA32Q96LK8 384 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 GDPD2Q9HCC8 539 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 WDR6Q9NNW5 1121 aaKnown RBP6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 HCFC1R1Q9NWW0 138 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 FAM13BQ9NYF5 915 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 GMPR2Q9P2T1 348 aaKnown RBP6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 DPP7Q9UHL4 492 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 SERTAD1Q9UHV2 236 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 FBXL5Q9UKA1 691 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 CFAP45Q9UL16 551 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 EXOC7Q9UPT5 735 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 USTQ9Y2C2 406 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 BACE2Q9Y5Z0 518 aa6.25□□□□□ -1.41
HMGB1P20-201ENST00000402555 WDFY4Q6ZS81 3184 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 H7C4K7 107 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 M0QZQ0 153 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PRRG1O14668 218 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 XPOTO43592 962 aaKnown RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 NARSO43776 548 aaKnown RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ABLIM3O94929 683 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 VNN2O95498 520 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 C1RP00736 705 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 HNRNPA1P09651 372 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PDIA4P13667 645 aaKnown RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 CPB1P15086 417 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PFKFB1P16118 471 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 FSHRP23945 695 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms