RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 PKN2Q16513 984 aaKnown RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 TBC1D10BQ4KMP7 808 aaPredicted RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 C2CD6Q53TS8 623 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 TDRD10Q5VZ19 366 aaKnown RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 FAM47EQ6ZV65 393 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF276Q8N554 614 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF398Q8TD17 642 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 LRRC37BQ96QE4 947 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 FAM118BQ9BPY3 351 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 RNPEPL1Q9HAU8 725 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 DNPEPQ9ULA0 475 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 PEX11AO75192 247 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 PECAM1P16284 738 aaPredicted RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 CALB2P22676 271 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 PAX7P23759 505 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 RXRBP28702 533 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 BLMHQ13867 455 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF622Q969S3 477 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 GMLQ99445 158 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 DHRS4Q9BTZ2 278 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
FAM47DP-201ENST00000402340 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 NDC80O14777 642 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 MMP10P09238 476 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CD58P19256 250 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 WNT7BP56706 349 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CUL2Q13617 745 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ZYXQ15942 572 aaKnown RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 UBR7Q8N806 425 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 APOBEC3GQ9HC16 384 aaKnown RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 NKX1-2Q9UD57 310 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 TLR3O15455 904 aaKnown RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF862O60290 1169 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ITGAVP06756 1048 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 FGFR1P11362 822 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 GM2AP17900 193 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 RPA3P35244 121 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF132P52740 706 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ZNF252P-AS1Q0IIN9 211 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 FASTKD3Q14CZ7 662 aaKnown RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SLC45A4Q5BKX6 768 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SLCO1B3Q9NPD5 702 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PCDHA10Q9Y5I2 948 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SIP14410 1827 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 C2CD2LO14523 706 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SPAG7O75391 227 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 TJP3O95049 919 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 MMP8P22894 467 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ADCY1Q08828 1119 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SLC1A5Q15758 541 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CTC1Q2NKJ3 1217 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 WASHC2DQ5SRD0 308 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 MZB1Q8WU39 189 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 SMC6Q96SB8 1091 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 CORO1CQ9ULV4 474 aaPredicted RBP13.17□□□□□ -0.3
FAM47DP-201ENST00000402340 PTPRJQ12913 1337 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 A6NHS1 94 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 DGAT1O75907 488 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 PIGRP01833 764 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
FAM47DP-201ENST00000402340 WDR81Q562E7 1941 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms