RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 GPR17Q13304 367 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 FAM26FQ5R3K3 315 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 ARMCX5Q6P1M9 558 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 GPD1LQ8N335 351 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 OR10T2Q8NGX3 314 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 SCFD1Q8WVM8 642 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 PGLYRP2Q96PD5 576 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 RTP3Q9BQQ7 232 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 CEP72Q9P209 647 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 SERTAD1Q9UHV2 236 aa17.14■□□□□ 0.33
ATG4B-203ENST00000400772 MRPS23Q9Y3D9 190 aaKnown RBP17.14■□□□□ 0.33
ATG4B-203ENST00000400772 CYB561D2O14569 222 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 EIF3DO15371 548 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATG4B-203ENST00000400772 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
ATG4B-203ENST00000400772 CFHP08603 1231 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 SRFP11831 508 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 CCR2P41597 374 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 AFMP43652 599 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
ATG4B-203ENST00000400772 CWF19L1Q69YN2 538 aaKnown RBP17.13■□□□□ 0.33
ATG4B-203ENST00000400772 STXBP4Q6ZWJ1 553 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 TMEM105Q8N8V8 129 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 ING5Q8WYH8 240 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 TCEAL4Q96EI5 215 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
ATG4B-203ENST00000400772 WNT16Q9UBV4 365 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
ATG4B-203ENST00000400772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-203ENST00000400772 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 MTMR11A4FU01 709 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 KRBA1A5PL33 1030 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
ATG4B-203ENST00000400772 KLRC4O43908 158 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 MOSPD3O75425 235 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 SLFN14P0C7P3 912 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 CEBPBP17676 345 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 CMA1P23946 247 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
ATG4B-203ENST00000400772 TCF15Q12870 199 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 DUSP4Q13115 394 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 HS6ST3Q8IZP7 471 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 SIX5Q8N196 739 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 ATAD1Q8NBU5 361 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
ATG4B-203ENST00000400772 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 SIX4Q9UIU6 781 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 FBXL21Q9UKT6 434 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 AGAP1Q9UPQ3 857 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
ATG4B-203ENST00000400772 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-203ENST00000400772 MICAL2O94851 1124 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 ITGB3P05106 788 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 PFKFB1P16118 471 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 KRT85P78386 507 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 NHLH1Q02575 133 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-203ENST00000400772 ASTLQ6HA08 431 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-203ENST00000400772 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 NELFCDQ8IXH7 590 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 CACTINQ8WUQ7 758 aaKnown RBP17.11■□□□□ 0.33
ATG4B-203ENST00000400772 MCRS1Q96EZ8 462 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 SPATA32Q96LK8 384 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 ZNF512Q96ME7 567 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-203ENST00000400772 LRRC3Q9BY71 257 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 SLC2A4RGQ9NR83 387 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 AGPAT3Q9NRZ7 376 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 GDE1Q9NZC3 331 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 DSEQ9UL01 958 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 YIPF1Q9Y548 306 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 TSC2P49815 1807 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
ATG4B-203ENST00000400772 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 CLIC2O15247 247 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 PI15O43692 258 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 CLCN5P51795 746 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 CDR1P51861 262 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 EPHA5P54756 1037 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 GPC5P78333 572 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 BMT2Q1RMZ1 405 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 SV2CQ496J9 727 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 MTSS1LQ765P7 747 aa17.1■□□□□ 0.33
ATG4B-203ENST00000400772 PDZD4Q76G19 769 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-203ENST00000400772 CEP57L1Q8IYX8 460 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms