RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 LRRC3BQ96PB8 259 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 TIPINQ9BVW5 301 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 HELZP42694 1942 aaKnown RBP12.98□□□□□ -0.33
LINC00544-201ENST00000400540 MTMR11A4FU01 709 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 LACTBL1A8MY62 500 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 PRR5-ARHGAP8B1AHC4 643 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 CHURC1-FNTBB4DL54 471 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 LAD1O00515 517 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 FAM189A1O60320 539 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 FNTBP49356 437 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 NRLP54845 237 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 SLC12A3P55017 1021 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 NCKAP1LP55160 1127 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 ARHGAP8P85298 464 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 HYIQ5T013 277 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 DSTYKQ6XUX3 929 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 SYT2Q8N9I0 419 aaPredicted RBP12.97□□□□□ -0.33
LINC00544-201ENST00000400540 CSGALNACT1Q8TDX6 532 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 BICD1Q96G01 975 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 KIF2CQ99661 725 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 MAFFQ9ULX9 164 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 CHD8Q9HCK8 2581 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 WDFY3Q8IZQ1 3526 aa12.97□□□□□ -0.33
LINC00544-201ENST00000400540 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 MAP1BP46821 2468 aaKnown RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 K7ESF4 209 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 CHADO15335 359 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 HRO43593 1189 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 KRT37O76014 449 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 CLTAP09496 248 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 PLA2G4BP0C869 781 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 CXCL12P48061 93 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 SMTNP53814 917 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 EPHB3P54753 998 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 FCHO2Q0JRZ9 810 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 GPR17Q13304 367 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 PPP2R5DQ14738 602 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ARSHQ5FYA8 562 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 LAIR1Q6GTX8 287 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 OVOS1Q6IE37 1185 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 USP37Q86T82 979 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ARID3BQ8IVW6 561 aaPredicted RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 LRRC15Q8TF66 581 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 RTKNQ9BST9 563 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 GTSE1Q9NYZ3 720 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
LINC00544-201ENST00000400540 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
LINC00544-201ENST00000400540 ACACBO00763 2458 aa12.96□□□□□ -0.34
LINC00544-201ENST00000400540 CFAP47Q6ZTR5 3102 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 VWA3AA6NCI4 1184 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 OR6C75A6NL08 312 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 NEFLP07196 543 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 CYP3A5P20815 502 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 SDHBP21912 280 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 GABRR2P28476 465 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 CTHP32929 405 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 ALDH1A3P47895 512 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 LIG4P49917 911 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 CYP4F8P98187 520 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 PLD1Q13393 1074 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 SIM2Q14190 667 aaPredicted RBP12.95□□□□□ -0.34
LINC00544-201ENST00000400540 PON2Q15165 354 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 TMEM119Q4V9L6 283 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
LINC00544-201ENST00000400540 HAUS6Q7Z4H7 955 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 CELF5Q8N6W0 485 aaKnown RBP12.95□□□□□ -0.34
LINC00544-201ENST00000400540 OR10T2Q8NGX3 314 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 REEP2Q9BRK0 252 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 GPR88Q9GZN0 384 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 ATXN3LQ9H3M9 355 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
LINC00544-201ENST00000400540 FRYQ5TBA9 3013 aa12.95□□□□□ -0.34
LINC00544-201ENST00000400540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
LINC00544-201ENST00000400540 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
LINC00544-201ENST00000400540 K7ENM7 598 aa12.94□□□□□ -0.34
LINC00544-201ENST00000400540 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
LINC00544-201ENST00000400540 GDF9O60383 454 aa12.94□□□□□ -0.34
LINC00544-201ENST00000400540 RETP07949 1114 aa12.94□□□□□ -0.34
LINC00544-201ENST00000400540 NFICP08651 508 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms