RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 PNPLA4P41247 253 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 RPS9P46781 194 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 ZBTB41Q5SVQ8 909 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 CRELD2Q6UXH1 353 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 NKD2Q969F2 451 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 MSANTD3Q96H12 275 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 SENP8Q96LD8 212 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 CORO1BQ9BR76 489 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 CEP72Q9P209 647 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 DENND4CQ5VZ89 1909 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 MYMKA6NI61 221 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ANKRD63C9JTQ0 380 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 MAN2B1O00754 1011 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 NCAM2O15394 837 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 FCARP24071 287 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 TAF6P49848 677 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 EPHB3P54753 998 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 TWF1Q12792 350 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ZC2HC1CQ53FD0 456 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ATL3Q6DD88 541 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ZC3H14Q6PJT7 736 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 LINC00301Q8NCQ3 95 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 IRF7Q92985 503 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 USP28Q96RU2 1077 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 LRRC3Q9BY71 257 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 TNMDQ9H2S6 317 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 MRPL44Q9H9J2 332 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 OBP2AQ9NY56 170 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 FBXO4Q9UKT5 387 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 YIPF1Q9Y548 306 aa15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 NUP210Q8TEM1 1887 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-204ENST00000400122 STK25O00506 426 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 MOSPD3O75425 235 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 VNN2O95498 520 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 YEATS4O95619 227 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 CEBPBP17676 345 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 PSMC3P17980 439 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 CCR2P41597 374 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 STAT6P42226 847 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 ACOT2P49753 483 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 ARPP19P56211 112 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 STXBP4Q6ZWJ1 553 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 ITIH5Q86UX2 942 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 BRSK2Q8IWQ3 736 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 POMGNT1Q8WZA1 660 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 PSMG2Q969U7 264 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 BCO2Q9BYV7 579 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 ZCWPW1Q9H0M4 648 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 FAM86C1Q9NVL1 165 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 DPP3Q9NY33 737 aa15.68■□□□□ 0.1
SMARCE1-204ENST00000400122 MTMR11A4FU01 709 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 SPTLC1O15269 473 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 NFICP08651 508 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 ALDH1A3P47895 512 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 SNRPFP62306 86 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 AMPD3Q01432 767 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 SPAG1Q07617 926 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 DUSP4Q13115 394 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 SV2CQ496J9 727 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 TANGO2Q6ICL3 276 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 POTEHQ6S545 545 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 ZNF852Q6ZMS4 543 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 TMC8Q8IU68 726 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 MFSD6LQ8IWD5 586 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 THEM5Q8N1Q8 247 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 LRRC52Q8N7C0 313 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 CACTINQ8WUQ7 758 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 MCRS1Q96EZ8 462 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 ZNF560Q96MR9 790 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 KXD1Q9BQD3 176 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 LTB4R2Q9NPC1 389 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 COL4A2P08572 1712 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
SMARCE1-204ENST00000400122 FCHO2Q0JRZ9 810 aa15.66■□□□□ 0.1
SMARCE1-204ENST00000400122 SNW1Q13573 536 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-204ENST00000400122 E2F4Q16254 413 aa15.66■□□□□ 0.1
SMARCE1-204ENST00000400122 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
SMARCE1-204ENST00000400122 ASCL5Q7RTU5 278 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms