RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TULP2O00295 520 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 SERPING1P05155 500 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 TNNT1P13805 278 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 CYP11B1P15538 503 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 MFAP3P55082 362 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 ACOT1Q86TX2 421 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 ENPP3O14638 875 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 N4BP1O75113 896 aaKnown RBP12.51□□□□□ -0.41
SKA3-203ENST00000400018 FMO1Q01740 532 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 ZNF667Q5HYK9 610 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 KCNN1Q92952 543 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 CAPN6Q9Y6Q1 641 aa12.51□□□□□ -0.41
SKA3-203ENST00000400018 THAP12O43422 761 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NCK2O43639 380 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 MAGEA1P43355 309 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 EPHB4P54760 987 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NAP1L1P55209 391 aaKnown RBP12.5□□□□□ -0.41
SKA3-203ENST00000400018 NAB2Q15742 525 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 USP37Q86T82 979 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 TMEM209Q96SK2 561 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NOCTQ9UK39 431 aaKnown RBP12.5□□□□□ -0.41
SKA3-203ENST00000400018 C9IYK1 514 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 CLDN5O00501 218 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
SKA3-203ENST00000400018 B3GAT3O94766 335 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 IL18RAPO95256 599 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 CCDC175P0C221 793 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NDST1P52848 882 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 GNG11P61952 73 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 SGSM1Q2NKQ1 1148 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 FAM182AQ5T1J6 154 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 ALKBH5Q6P6C2 394 aaKnown RBP12.5□□□□□ -0.41
SKA3-203ENST00000400018 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 OR6B3Q8NGW1 331 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 ASB7Q9H672 318 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 TTC3P53804 2025 aa12.5□□□□□ -0.41
SKA3-203ENST00000400018 COL6A3P12111 3177 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 THP07101 528 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 OR4Q2P0C623 313 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 GNA15P30679 374 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 ABCD1P33897 745 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 CDC42EP1Q00587 391 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 NAA35Q5VZE5 725 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 WSCD1Q658N2 575 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 OSTM1Q86WC4 334 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 C7orf61Q8IZ16 206 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 SMARCAL1Q9NZC9 954 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 L1RE1Q9UN81 338 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 A0A0C4DFX4 3053 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 CLTBP09497 229 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 CAPN2P17655 700 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 CYP3A5P20815 502 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 FECHP22830 423 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 OR1G1P47890 313 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 LILRA4P59901 499 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 SLC20A2Q08357 652 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 FAM26DQ5JW98 314 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 SLC35F6Q8N357 371 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 DDX1Q92499 740 aaKnown RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 NDRG1Q92597 394 aaKnown RBP12.49□□□□□ -0.41
SKA3-203ENST00000400018 CYTH4Q9UIA0 394 aa12.49□□□□□ -0.41
SKA3-203ENST00000400018 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 P4HA2O15460 535 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 CCDC130P13994 396 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 AXLP30530 894 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 CXCR5P32302 372 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
SKA3-203ENST00000400018 PTPN14Q15678 1187 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 ARHGAP29Q52LW3 1261 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 PLEKHG4Q58EX7 1191 aa12.48□□□□□ -0.41
SKA3-203ENST00000400018 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms