RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.16
LDLRAD4-203ENST00000399848 SERPIND1P05546 499 aa14.02□□□□□ -0.16
LDLRAD4-203ENST00000399848 ST13P50502 369 aaKnown RBP14.02□□□□□ -0.16
LDLRAD4-203ENST00000399848 FGD2Q7Z6J4 655 aa14.02□□□□□ -0.16
LDLRAD4-203ENST00000399848 MMP19Q99542 508 aa14.02□□□□□ -0.16
LDLRAD4-203ENST00000399848 CASP1P29466 404 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 KCNK10P57789 538 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 KIZQ2M2Z5 673 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 TRAPPC11Q7Z392 1133 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 CD274Q9NZQ7 290 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 CAND2O75155 1236 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 GRID1Q9ULK0 1009 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 USP6P35125 1406 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 TCHHQ07283 1943 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 USP10Q14694 798 aaKnown RBP14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 LVRNQ6Q4G3 990 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 PAK5Q9P286 719 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 UGGT1Q9NYU2 1555 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 PLOD1Q02809 727 aaPredicted RBP14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 PTK6Q13882 451 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 SLC9A5Q14940 896 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 PHKG1Q16816 387 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 GALNT4Q8N4A0 578 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 LRRC1Q9BTT6 524 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 BBS2Q9BXC9 721 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 BRD8Q9H0E9 1235 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 PCMTD2Q9NV79 361 aa14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 LSM7Q9UK45 103 aaKnown RBP14.02□□□□□ -0.17
LDLRAD4-203ENST00000399848 RNF103O00237 685 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 C3orf62Q6ZUJ4 267 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SPATA18Q8TC71 538 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 TK2O00142 265 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 CCDC157Q569K6 752 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MICU2Q8IYU8 434 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 NMRK1Q9NWW6 199 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 C6orf203Q9P0P8 240 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 PCDHA10Q9Y5I2 948 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SSU72P8A0A1W2PR75 194 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MMP10P09238 476 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 TRIM16LQ309B1 348 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SNX31Q8N9S9 440 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 HES6Q96HZ4 224 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 PDIA5Q14554 519 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ST13P5Q8NFI4 369 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 KATNAL1Q9BW62 490 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MARCOQ9UEW3 520 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 LIMA1Q9UHB6 759 aaKnown RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MLNP12872 115 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ST8SIA6P61647 398 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 WNK4Q96J92 1243 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 FRMD8Q9BZ67 464 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ADGRA2Q96PE1 1338 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 ARHGEF7Q14155 803 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 PDK1Q15118 436 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MS4A14Q96JA4 679 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 CATSPERBQ9H7T0 1116 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 EXOSC4Q9NPD3 245 aaKnown RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 PDP2Q9P2J9 529 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 JCADQ9P266 1359 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SNRPAP09012 282 aaKnown RBP14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 KBTBD12Q3ZCT8 623 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 UGT3A1Q6NUS8 523 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 SMARCAD1Q9H4L7 1026 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 KRT84Q9NSB2 600 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 RNF146Q9NTX7 359 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 TUBGCP4Q9UGJ1 667 aa14.01□□□□□ -0.17
LDLRAD4-203ENST00000399848 EYA4O95677 639 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 TAF1CQ15572 869 aaPredicted RBP14□□□□□ -0.17
LDLRAD4-203ENST00000399848 LONRF1Q17RB8 773 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 CYFIP1Q7L576 1253 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 ACAD9Q9H845 621 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 NEO1Q92859 1461 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 CFAP99D6REC4 459 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 NUP107P57740 925 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
LDLRAD4-203ENST00000399848 E4F1Q66K89 784 aaPredicted RBP14□□□□□ -0.17
LDLRAD4-203ENST00000399848 LINC00523Q86TU6 105 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 CYP26A1O43174 497 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 FCGRTP55899 365 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 DDI1Q8WTU0 396 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 ECSITQ9BQ95 431 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
LDLRAD4-203ENST00000399848 IL1RAPL1Q9NZN1 696 aa14□□□□□ -0.17
LDLRAD4-203ENST00000399848 MSRAQ9UJ68 235 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms