RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 COPS2P61201 443 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 KYNUQ16719 465 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 DAB2IPQ5VWQ8 1189 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 IZUMO3Q5VZ72 239 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 EXOC8Q8IYI6 725 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 SEPT1Q8WYJ6 367 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 GAS2O43903 313 aaKnown RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 HARSP12081 509 aaKnown RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 KLRC2P26717 231 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 MKRN4PQ13434 485 aaPredicted RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 SGSM1Q2NKQ1 1148 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 TMEM35BQ8NCS4 154 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.46■■□□□ 1.511e-6■□□□□ 11.1
RABGGTA-202ENST00000399409 TCP11Q8WWU5 503 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 PRPF31Q8WWY3 499 aaKnown RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 LGALS13Q9UHV8 139 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 FAM189A1O60320 539 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 JPH2Q9BR39 696 aaPredicted RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 NIF3L1Q9GZT8 377 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 RGS17Q9UGC6 210 aaPredicted RBP24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 WDR90Q96KV7 1748 aa24.46■■□□□ 1.51
RABGGTA-202ENST00000399409 SSC5DA1L4H1 1573 aa24.45■■□□□ 1.51
RABGGTA-202ENST00000399409 CCT8L1PA6NM43 557 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 OGTO15294 1046 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 MSCO60682 206 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 TJP3O95049 919 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 SSTR3P32745 418 aaPredicted RBP24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 PTPN7P35236 360 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 GJC1P36383 396 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 STAT4Q14765 748 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 DUOXA2Q1HG44 320 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 CCDC38Q502W7 563 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 CDCA2Q69YH5 1023 aaPredicted RBP24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 HIBCHQ6NVY1 386 aaPredicted RBP24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 GSTA5Q7RTV2 222 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 SLITRK1Q96PX8 696 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 TCHPQ9BT92 498 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 GGA3Q9NZ52 723 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 VIMP08670 466 aaKnown RBP24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 DNAJC24Q6P3W2 148 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 METTL7BQ6UX53 244 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 ZBTB8OSQ8IWT0 167 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 TRPM4Q8TD43 1214 aa24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 ACO2Q99798 780 aaKnown RBP24.45■■□□□ 1.5
RABGGTA-202ENST00000399409 TCRBV5S1A1TA0A578 114 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 NDC80O14777 642 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 LIASO43766 372 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 ZBTB7AO95365 584 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 CST3P01034 146 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 ABHD2P08910 425 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 VPS41P49754 854 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 MXD4Q14582 209 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 SEZ6Q53EL9 994 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 ICE2Q659A1 982 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 ZCCHC9Q8N567 271 aaKnown RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 DDX56Q9NY93 547 aaKnown RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 SOWAHBA6NEL2 793 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 DNM1LO00429 736 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 KRT1P04264 644 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 CDH5P33151 784 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 TCF7P36402 384 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 TNFSF9P41273 254 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 PIGHQ14442 188 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 EAPPQ56P03 285 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 ZBTB33Q86T24 672 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 DYDC1Q8WWB3 177 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 C2orf40Q9H1Z8 148 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 PCDHGC3Q9UN70 934 aa24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 DRG1Q9Y295 367 aaKnown RBP24.44■■□□□ 1.5
RABGGTA-202ENST00000399409 TMEM120BA0PK00 339 aa24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 MYL6P60660 151 aa24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 RPL7AP62424 266 aaKnown RBP24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 KCNV1Q6PIU1 500 aa24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 RIBC1Q8N443 379 aaPredicted RBP24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 FAM212AQ96EL1 285 aa24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 CISHQ9NSE2 258 aa24.43■■□□□ 1.5
RABGGTA-202ENST00000399409 CDH16O75309 829 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 GJB6O95452 261 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 EIF4BP23588 611 aaKnown RBP24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 SCTRP47872 440 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 YWHAEP62258 255 aaKnown RBP24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 TRPC3Q13507 836 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 DCUN1D2Q6PH85 259 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 VSTM1Q6UX27 236 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 ANKS1BQ7Z6G8 1248 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 MTMR12Q9C0I1 747 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 DNAJC17Q9NVM6 304 aaKnown RBP24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 BTBD7Q9P203 1132 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 CPSF3Q9UKF6 684 aaKnown RBP24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 CEP83Q9Y592 693 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 ACTL7BQ9Y614 415 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 A0A0G2JMZ2 1700 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 RASSF9O75901 435 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 PRKCBP05771 671 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 IFNAR2P48551 515 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 MAPK6Q16659 721 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 SPOCD1Q6ZMY3 1216 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 NIPA2Q8N8Q9 360 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 GPRC5DQ9NZD1 345 aa24.42■■□□□ 1.5
RABGGTA-202ENST00000399409 USP2O75604 605 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms