RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TEX28O15482 410 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 CLASP2O75122 1294 aaKnown RBP18.99■□□□□ 0.63
CTNS-203ENST00000399306 TRIM49P0CI25 452 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 TRIM49CP0CI26 452 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 MXI1P50539 228 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 RAB33AQ14088 237 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 ELMSAN1Q6PJG2 1045 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 METTL23Q86XA0 190 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 TMEM130Q8N3G9 435 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 SLC22A17Q8WUG5 538 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 AUTS2Q8WXX7 1259 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 BPIFA3Q9BQP9 254 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 CLSTN3Q9BQT9 956 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 FAM124BQ9H5Z6 455 aaPredicted RBP18.99■□□□□ 0.63
CTNS-203ENST00000399306 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 TSC2P49815 1807 aa18.99■□□□□ 0.63
CTNS-203ENST00000399306 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.98■□□□□ 0.63
CTNS-203ENST00000399306 I3L4J1 428 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 C2CD2LO14523 706 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 HUS1O60921 280 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 VNN1O95497 513 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 CAVIN2O95810 425 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 ASS1P00966 412 aaKnown RBP18.98■□□□□ 0.63
CTNS-203ENST00000399306 P4HA1P13674 534 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 KLRC2P26717 231 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 GCLMP48507 274 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 CLCN4P51793 760 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 TCERG1LQ5VWI1 586 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 OVOS1Q6IE37 1185 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 CASP10Q92851 521 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 FUCA2Q9BTY2 467 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 IMPG2Q9BZV3 1241 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 DZANK1Q9NVP4 752 aa18.98■□□□□ 0.63
CTNS-203ENST00000399306 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
CTNS-203ENST00000399306 TACC1O75410 805 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 PAPLNO95428 1278 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 HLA-DRAP01903 254 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 LHX1P48742 406 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 MYL6P60660 151 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 SMARCB1Q12824 385 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 ZNF699Q32M78 642 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 DCAF17Q5H9S7 520 aaPredicted RBP18.97■□□□□ 0.63
CTNS-203ENST00000399306 TPGS2Q68CL5 300 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 SMYD5Q6GMV2 418 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 LILRA6Q6PI73 481 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 IRF2BP1Q8IU81 584 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 THEM5Q8N1Q8 247 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 MICALL1Q8N3F8 863 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 FBXL13Q8NEE6 735 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 B3GALT6Q96L58 329 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 CNOT6LQ96LI5 555 aaKnown RBP18.97■□□□□ 0.63
CTNS-203ENST00000399306 PLEKHA4Q9H4M7 779 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 FBXL5Q9UKA1 691 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTNS-203ENST00000399306 SNX9Q9Y5X1 595 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 HCFC2Q9Y5Z7 792 aa18.97■□□□□ 0.63
CTNS-203ENST00000399306 GABRDO14764 452 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 GLUD1P00367 558 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 HOXB8P17481 243 aaPredicted RBP18.96■□□□□ 0.63
CTNS-203ENST00000399306 EEF1GP26641 437 aaKnown RBP18.96■□□□□ 0.63
CTNS-203ENST00000399306 CA8P35219 290 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 PIK3CAP42336 1068 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 FMO5P49326 533 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 TNNC1P63316 161 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 MYL5Q02045 173 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 CETN1Q12798 172 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 CTXN3Q4LDR2 81 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 ZNF667Q5HYK9 610 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 PRSS55Q6UWB4 352 aaPredicted RBP18.96■□□□□ 0.63
CTNS-203ENST00000399306 RBM23Q86U06 439 aaKnown RBP18.96■□□□□ 0.63
CTNS-203ENST00000399306 CCDC150Q8NCX0 1101 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 FAM84AQ96KN4 292 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 RAB20Q9NX57 234 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 MAGEC2Q9UBF1 373 aaPredicted RBP18.96■□□□□ 0.63
CTNS-203ENST00000399306 L1RE1Q9UN81 338 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 NFE2L3Q9Y4A8 694 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 REV3LO60673 3130 aa18.96■□□□□ 0.63
CTNS-203ENST00000399306 COL6A3P12111 3177 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 PER2O15055 1255 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 ABLIM3O94929 683 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 GLP2RO95838 553 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 WARSP23381 471 aaKnown RBP18.95■□□□□ 0.62
CTNS-203ENST00000399306 OR1D2P34982 312 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 KCNH2Q12809 1159 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 SOWAHAQ2M3V2 549 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 WDR72Q3MJ13 1102 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 WSCD1Q658N2 575 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 SCARA3Q6AZY7 606 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 CYP26C1Q6V0L0 522 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 C11orf57Q6ZUT1 292 aaPredicted RBP18.95■□□□□ 0.62
CTNS-203ENST00000399306 PDCL2Q8N4E4 241 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 ZNF461Q8TAF7 563 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 TAS1R2Q8TE23 839 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 HLA-CQ95604 372 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 ACBD6Q9BR61 282 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 RHOBTB2Q9BYZ6 727 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 DNAJC25Q9H1X3 360 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 UBE2ZQ9H832 354 aaPredicted RBP18.95■□□□□ 0.62
CTNS-203ENST00000399306 HSFX1Q9UBD0 423 aa18.95■□□□□ 0.62
CTNS-203ENST00000399306 CDY1Q9Y6F8 540 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms