RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SRFP11831 508 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 SNRPFP62306 86 aaKnown RBP16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 SURF1Q15526 300 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 BMT2Q1RMZ1 405 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 NPAS3Q8IXF0 933 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 ELMOD1Q8N336 334 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 LEMD2Q8NC56 503 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 GDE1Q9NZC3 331 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 NUMBLQ9Y6R0 609 aa16.06■□□□□ 0.16
SMIM11A-203ENST00000399299 CACNA1HO95180 2353 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 CYB561D2O14569 222 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 NARSO43776 548 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 VNN2O95498 520 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 CASP1P29466 404 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 AVPR2P30518 371 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 AFMP43652 599 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 NUBP1P53384 320 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 EPHA5P54756 1037 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 VCPP55072 806 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 PLD1Q13393 1074 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 CUL4BQ13620 913 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 METTL23Q86XA0 190 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 LRRC52Q8N7C0 313 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 FGF14Q92915 247 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 CGNQ9P2M7 1197 aaKnown RBP16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 WNT16Q9UBV4 365 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 HPSEQ9Y251 543 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
SMIM11A-203ENST00000399299 FAM237AA0A1B0GTK4 181 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 MTMR11A4FU01 709 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 ZNF197O14709 1029 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 ITGB3P05106 788 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 MYL1P05976 194 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 OR4Q2P0C623 313 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 PFKFB1P16118 471 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 POLR2BP30876 1174 aaKnown RBP16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 CLCN5P51795 746 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 TWF1Q12792 350 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 BECN1Q14457 450 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 SLC5A9Q2M3M2 681 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 PRSS36Q5K4E3 855 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 CENPPQ6IPU0 288 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 PARM1Q6UWI2 310 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 OR10T2Q8NGX3 314 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 CXorf38Q8TB03 319 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 CORO1BQ9BR76 489 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 MFSD1Q9H3U5 465 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 SLC2A4RGQ9NR83 387 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 INTS13Q9NVM9 706 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 CEP72Q9P209 647 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 FBXL21Q9UKT6 434 aa16.04■□□□□ 0.16
SMIM11A-203ENST00000399299 A0A1B0GVL5 298 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 KLRC4O43908 158 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 CEBPBP17676 345 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 SMARCB1Q12824 385 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 DUSP4Q13115 394 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 IER5LQ5T953 404 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 ASTLQ6HA08 431 aaPredicted RBP16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 HS2ST1Q7LGA3 356 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 CBWD2Q8IUF1 395 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 C12orf56Q8IXR9 622 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 THEM5Q8N1Q8 247 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 SPATA18Q8TC71 538 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 NOC3LQ8WTT2 800 aaKnown RBP16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 ING5Q8WYH8 240 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 PAGE5Q96GU1 130 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 ANKRD36BP1Q96IX9 119 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 PGLYRP2Q96PD5 576 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 TMEM209Q96SK2 561 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 RTP3Q9BQQ7 232 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 ZCWPW1Q9H0M4 648 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 CRISPLD1Q9H336 500 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 AGAP1Q9UPQ3 857 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 ASB3Q9Y575 518 aa16.03■□□□□ 0.16
SMIM11A-203ENST00000399299 CFHP08603 1231 aa16.02■□□□□ 0.16
SMIM11A-203ENST00000399299 ALDH1A3P47895 512 aa16.02■□□□□ 0.16
SMIM11A-203ENST00000399299 EPHB3P54753 998 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms