RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 GLI1P08151 1106 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 NFICP08651 508 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PAFAH1B1P43034 410 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 LBX1P52954 281 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 BPIFB4P59827 614 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 POU5F1Q01860 360 aaKnown RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF699Q32M78 642 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 JADE1Q6IE81 842 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 ACAD10Q6JQN1 1059 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PHLDB2Q86SQ0 1253 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 RNF180Q86T96 592 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 RASGEF1CQ8N431 466 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CXorf38Q8TB03 319 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CYFIP2Q96F07 1278 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 GDAP1L1Q96MZ0 367 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 UBXN6Q9BZV1 441 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 DDX20Q9UHI6 824 aaKnown RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 SIX4Q9UIU6 781 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 AMFRQ9UKV5 643 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PCDHB4Q9Y5E5 795 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PCDHB2Q9Y5E7 798 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 MROH7Q68CQ1 1323 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CES2O00748 559 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 MTA2O94776 668 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 AXLP30530 894 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 HOXC8P31273 242 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 GRM5P41594 1212 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF132P52740 706 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 YARSP54577 528 aaKnown RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 TMEM132DQ14C87 1099 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 RBBP8NLQ8NC74 664 aaPredicted RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 CD101Q93033 1021 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF653Q96CK0 615 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 KRT12Q99456 494 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 AP1M1Q9BXS5 423 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 RNF14Q9UBS8 474 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 GTF3C4Q9UKN8 822 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
LINC00243-201ENST00000399196 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
LINC00243-201ENST00000399196 TMEM110-MUSTN1A8MSY1 372 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 WEE2P0C1S8 567 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 COMTP21964 271 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 GRK4P32298 578 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ASPAP45381 313 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 GUCY2FP51841 1108 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 NKX3-2P78367 333 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF211Q13398 564 aaPredicted RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 MESDQ14696 234 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CD302Q8IX05 232 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 MCOLN2Q8IZK6 566 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ZDHHC14Q8IZN3 488 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF564Q8TBZ8 553 aaPredicted RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 TAF4BQ92750 862 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 MRRFQ96E11 262 aaKnown RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 PBKQ96KB5 322 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 EIF2AQ9BY44 585 aaKnown RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 POLIQ9UNA4 740 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 FRMPD3Q5JV73 1810 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ESYT3A0FGR9 886 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 RAD51CO43502 376 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ITGB3P05106 788 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CTSHP09668 335 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CD58P19256 250 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 RRM1P23921 792 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CST5P28325 142 aaPredicted RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 GNA15P30679 374 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 PEX5P50542 639 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 NOMO3P69849 1222 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 PTP4A2Q12974 167 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF394Q53GI3 561 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SCARA5Q6ZMJ2 495 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 MON1BQ7L1V2 547 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 KLHL7Q8IXQ5 586 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 KRT222Q8N1A0 295 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 KLHDC9Q8NEP7 349 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms