RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 PTPRHQ9HD43 1115 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 MORF4L1Q9UBU8 362 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 MGAMO43451 1857 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 GOLGA8KD6RF30 607 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 PROZP22891 400 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 CTNNA2P26232 953 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 MNAT1P51948 309 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 SNX1Q13596 522 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 MAMDC4Q6UXC1 1216 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 CCDC105Q8IYK2 499 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 PPME1Q9Y570 386 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 CEP350Q5VT06 3117 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 GPR25O00155 361 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 STRNO43815 780 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 GH1P01241 217 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 CHRNA3P32297 505 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 PTGIRP43119 386 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 ATP1A2P50993 1020 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 INHBEP58166 350 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 RPL7AP62424 266 aaKnown RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 MAMLD1Q13495 774 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 FAM110CQ1W6H9 321 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 TMC3Q7Z5M5 1100 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 ATG4AQ8WYN0 398 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 FAM118BQ9BPY3 351 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 KLHL11Q9NVR0 708 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 PLXNA1Q9UIW2 1896 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 BRCA2P51587 3418 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 MANSC4A6NHS7 340 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 TTC36A6NLP5 189 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 H0YHG0 523 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 NFICP08651 508 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 MYBL1P10243 752 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF132P52740 706 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 SARNPP82979 210 aaKnown RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 SIX1Q15475 284 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 ZKSCAN8Q15776 578 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-202ENST00000399127 SGSM1Q2NKQ1 1148 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 PLEKHH3Q7Z736 793 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 TADA2BQ86TJ2 420 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 FBXO25Q8TCJ0 367 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 SCLT1Q96NL6 688 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 FMO2Q99518 471 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 CNTN6Q9UQ52 1028 aa12.5□□□□□ -0.41
COL25A1-202ENST00000399127 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TNNC2P02585 160 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TMOD1P28289 359 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 ASPAP45381 313 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 AP3M2P53677 418 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 CDH8P55286 799 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TAS2R40P59535 323 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 CLUL1Q15846 466 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 UBR7Q8N806 425 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 EIF1ADQ8N9N8 165 aaKnown RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 XYLT2Q9H1B5 865 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 RPF1Q9H9Y2 349 aaKnown RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 GINS2Q9Y248 185 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 MEFVO15553 781 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 PROSCO94903 275 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TCF4P15884 667 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 HSPA6P17066 643 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 FGFR4P22455 802 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 COILP38432 576 aaPredicted RBP12.49□□□□□ -0.41
COL25A1-202ENST00000399127 PHKA2P46019 1235 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 PTP4A2Q12974 167 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 PPP2R5EQ16537 467 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
COL25A1-202ENST00000399127 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms