RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 AGO2Q9UKV8 859 aaKnown RBP15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 FGRP09769 529 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 ATP6V1C1P21283 382 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 TFDP1Q14186 410 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 MIIPQ5JXC2 388 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 SLFN12LQ6IEE8 588 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 RHOT1Q8IXI2 618 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 DDX50Q9BQ39 737 aaKnown RBP15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 TBC1D10AQ9BXI6 508 aa15.35■□□□□ 0.05
RPRD1A-202ENST00000399022 TTC4O95801 387 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 MCF2P10911 925 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 EEF1DP29692 281 aaKnown RBP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 C2CD6Q53TS8 623 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM81AQ8TBF8 368 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 RBM41Q96IZ5 413 aaKnown RBP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 HAUS8Q9BT25 410 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 ZNF302Q9NR11 478 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 E7ENQ6 273 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 EML1O00423 815 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 KRT38O76015 456 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 PDE5AO76074 875 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 GNA15P30679 374 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 PCYT1AP49585 367 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 CASP5P51878 434 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 RPS6KA2Q15349 733 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 OR6B2Q6IFH4 312 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 SAMD7Q7Z3H4 446 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM210AQ96ND0 272 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 SHCBP1LQ9BZQ2 653 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 AIPL1Q9NZN9 384 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 LOC100653049A0A140TA62 436 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 TLR3O15455 904 aaKnown RBP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 KRT34O76011 436 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 TMCC1O94876 653 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 RNF220Q5VTB9 566 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 DRC3Q9H069 523 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 JPH1Q9HDC5 661 aaPredicted RBP15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 FIS1Q9Y3D6 152 aa15.34■□□□□ 0.05
RPRD1A-202ENST00000399022 NFIBO00712 420 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 TMED10P49755 219 aaKnown RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 Q3C1V9 767 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 TMEM119Q4V9L6 283 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 NT5DC3Q86UY8 548 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 ZNF483Q8TF39 744 aaPredicted RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 GFM2Q969S9 779 aaKnown RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 ELMO3Q96BJ8 720 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 RIT2Q99578 217 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 DDX18Q9NVP1 670 aaKnown RBP15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 SLC9A2Q9UBY0 812 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 PCSK1NQ9UHG2 260 aa15.33■□□□□ 0.05
RPRD1A-202ENST00000399022 AUHQ13825 339 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 NPY5RQ15761 445 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 MAPK6Q16659 721 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 PRPF39Q86UA1 669 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 MICALL2Q8IY33 904 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 ATXN3P54252 364 aaPredicted RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM259Q4ZIN3 620 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 KCTD6Q8NC69 237 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 EZH1Q92800 747 aaPredicted RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 FAF2Q96CS3 445 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 SEPT10Q9P0V9 454 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 HSPA4LO95757 839 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 PSMA2P25787 234 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 SNX16P57768 344 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 SYCP2LQ5T4T6 812 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 CWF19L1Q69YN2 538 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 LCA5Q86VQ0 697 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 MPP4Q96JB8 637 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 HEXIM2Q96MH2 286 aaKnown RBP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 KIAA1683Q9H0B3 1180 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 ACAD9Q9H845 621 aa15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM150BA6NC51 233 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CES2O00748 559 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 RIBC1Q8N443 379 aaPredicted RBP15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC25A41Q8N5S1 370 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 HSPH1Q92598 858 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 MKNK1Q9BUB5 465 aa15.32■□□□□ 0.04
RPRD1A-202ENST00000399022 LDHAP00338 332 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms