RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CCDC90BQ9GZT6 254 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 BFARQ9NZS9 450 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 CNTNAP5Q8WYK1 1306 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 A0A087WUV0 522 aaPredicted RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 KCNN4O15554 427 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 MYBL1P10243 752 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ARMC6Q6NXE6 501 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 MFN1Q8IWA4 741 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 CENPKQ9BS16 269 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ARHGAP10A1A4S6 786 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 BLVRAP53004 296 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 SESN2P58004 480 aaPredicted RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 C10orf120Q5SQS8 335 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 MEI1Q5TIA1 1274 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 CCDC137Q6PK04 289 aaKnown RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 ING2Q9H160 280 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 TRIM45Q9H8W5 580 aaPredicted RBP14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 LCMT1Q9UIC8 334 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 MSRAQ9UJ68 235 aa14.96□□□□□ -0.01
PCDHA11-201ENST00000398640 SLIT2O94813 1529 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 SLC15A5A6NIM6 579 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 ARSEP51690 589 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 TWF1Q12792 350 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 CCDC144BQ3MJ40 725 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 DCP1BQ8IZD4 617 aaKnown RBP14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 ARL8AQ96BM9 186 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 TRIM33Q9UPN9 1127 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 PCDHB12Q9Y5F1 795 aa14.96□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM47DPA6NHR8 397 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 GRAP2O75791 330 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 TEX12Q9BXU0 123 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 HLA-DPA1P20036 260 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 TYK2P29597 1187 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 EIF3EP60228 445 aaKnown RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 WARS2Q9UGM6 360 aaKnown RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 CABYRO75952 493 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 TMED1Q13445 227 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 NCAPHQ15003 741 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 AMHR2Q16671 573 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 EMBQ6PCB8 327 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 HSPBP1Q9NZL4 362 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM205CA6NFA0 338 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 ZNF286BP0CG31 522 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 PPP3CCP48454 512 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 ATP2C1P98194 919 aaPredicted RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 NUDCD3Q8IVD9 361 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 SNF8Q96H20 258 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 CLMNQ96JQ2 1002 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 DNAJB2P25686 324 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 IZUMO3Q5VZ72 239 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 FMR1NBQ8N0W7 255 aaPredicted RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 TMEM60Q9H2L4 133 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
PCDHA11-201ENST00000398640 MAP3K13O43283 966 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 MCF2P10911 925 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 AARSP49588 968 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 WASHC5Q12768 1159 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SV2CQ496J9 727 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SARM1Q6SZW1 724 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 ANKEF1Q9NU02 776 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SPDYE5A6NIY4 337 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SPDYE7PQ495Y7 208 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 MDH1BQ5I0G3 518 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 CDR2LQ86X02 465 aaPredicted RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 ATPAF2Q8N5M1 289 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 TBC1D19Q8N5T2 526 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 KCNV2Q8TDN2 545 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 AGPAT1Q99943 283 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 TSSK1BQ9BXA7 367 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 WNT8AQ9H1J5 351 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 MAP10Q9P2G4 905 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 TTLL13PA6NNM8 815 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 IL18RAPO95256 599 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 PYGBP11216 843 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 MFSD4BQ5TF39 518 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 PPHLN1Q8NEY8 458 aaKnown RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 E2F8A0AVK6 867 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 H7C4K7 107 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 NFIBO00712 420 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 ZC3H11AO75152 810 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 CAV1Q03135 178 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 KCNB1Q14721 858 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 MFSD10Q14728 455 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 CATSPERGQ6ZRH7 1159 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 TMEM199Q8N511 208 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 CALR3Q96L12 384 aaKnown RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 APBA2Q99767 749 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms