RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 SPATA18Q8TC71 538 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 CELF4Q9BZC1 486 aaKnown RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 OSBPL8Q9BZF1 889 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 L3MBTL1Q9Y468 752 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 RNF103-CHMP3A0A140T963 221 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 GUCY1A3Q02108 690 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 DDR1Q08345 913 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 SNF8Q96H20 258 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 KATNAL1Q9BW62 490 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 EHD2Q9NZN4 543 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 ARFIP2P53365 341 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 BACE1P56817 501 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 CDR2Q01850 454 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 KYNUQ16719 465 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 CHSY1Q86X52 802 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 TGS1Q96RS0 853 aaKnown RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 MTIF3Q9H2K0 278 aaKnown RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 CHMP2BQ9UQN3 213 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 PFASO15067 1338 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
PCDHGA8-201ENST00000398604 TMEM247A6NEH6 219 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 EPHB2P29323 1055 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 PTK2BQ14289 1009 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ANKRD20A8PQ5CZ79 823 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 C15orf52Q6ZUT6 534 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 IFNEQ86WN2 208 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 SERPINI1Q99574 410 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 FOXN3O00409 490 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 CYP2C19P33261 490 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 IPMKQ8NFU5 416 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 TMEM169Q96HH4 297 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 GYPCP04921 128 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 MYBL1P10243 752 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 PCSK1P29120 753 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ST8SIA6P61647 398 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 FKBP1AP62942 108 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 MDH1BQ5I0G3 518 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ERO1BQ86YB8 467 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 SLC26A7Q8TE54 656 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ZC3H7BQ9UGR2 993 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ZFP69BQ9UJL9 534 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 MAFGO15525 162 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ESRRGP62508 458 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 KCNT1Q5JUK3 1230 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
PCDHGA8-201ENST00000398604 ZNF197O14709 1029 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 PMPCBO75439 489 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 IL1R1P14778 569 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 EPHX2P34913 555 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 CAV1Q03135 178 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 C1orf146Q5VVC0 180 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 DDIT4Q9NX09 232 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 GMNCA6NCL1 334 aa12.09□□□□□ -0.47
PCDHGA8-201ENST00000398604 FAM187AA6NFU0 413 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms