RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 DMWDQ09019 674 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
TFF3-202ENST00000398431 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
TFF3-202ENST00000398431 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 CELF5Q8N6W0 485 aaKnown RBP13.09□□□□□ -0.31
TFF3-202ENST00000398431 IER2Q9BTL4 223 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
TFF3-202ENST00000398431 C2orf42Q9NWW7 574 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 ANK1P16157 1881 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 MTMR11A4FU01 709 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 OR6C75A6NL08 312 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 SOAT2O75908 522 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 PIGRP01833 764 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 TYMPP19971 482 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 CXCL12P48061 93 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 SOX9P48436 509 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 EPHB3P54753 998 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 NRLP54845 237 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 LILRA4P59901 499 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 ARHGAP8P85298 464 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 MYBPC2Q14324 1141 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 LPAL2Q16609 132 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 RILPL1Q5EBL4 403 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 SLC39A4Q6P5W5 647 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 E2F7Q96AV8 911 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 SENP8Q96LD8 212 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 FIZ1Q96SL8 496 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
TFF3-202ENST00000398431 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
TFF3-202ENST00000398431 SCN1AP35498 2009 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 A0A0B4J269 797 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 K7ESF4 209 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 PIRO00625 290 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 OGTO15294 1046 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 MATR3P43243 847 aaKnown RBP eCLIP13.07□□□□□ -0.32
TFF3-202ENST00000398431 CCR3P51677 355 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 ZNF131P52739 623 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 LMNB2Q03252 620 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 SPEM2Q0P670 501 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 OVOS1Q6IE37 1185 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 USP37Q86T82 979 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 SPEM1Q8N4L4 309 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 OR10T2Q8NGX3 314 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
TFF3-202ENST00000398431 PSMG2Q969U7 264 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 ZFYVE19Q96K21 471 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 SLITRK6Q9H5Y7 841 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
TFF3-202ENST00000398431 RPF1Q9H9Y2 349 aaKnown RBP13.07□□□□□ -0.32
TFF3-202ENST00000398431 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 BLOC1S4Q9NUP1 217 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
TFF3-202ENST00000398431 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
TFF3-202ENST00000398431 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
TFF3-202ENST00000398431 ANO9A1A5B4 782 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 CHURC1-FNTBB4DL54 471 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 ANKRD63C9JTQ0 380 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 H0YCG3 227 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 PAPSS2O95340 614 aaPredicted RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 SDHBP21912 280 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 WEE1P30291 646 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 ALDH1A3P47895 512 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 FNTBP49356 437 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 LIG4P49917 911 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 SRSF5Q13243 272 aaKnown RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 PLD1Q13393 1074 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 KYAT1Q16773 422 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 C9orf57Q5W0N0 161 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 JADE1Q6IE81 842 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 Q6ZS52 159 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 TTC8Q8TAM2 541 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 BICD1Q96G01 975 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 CNTNAP3BQ96NU0 1288 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 RTKNQ9BST9 563 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 HSFX1Q9UBD0 423 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms