RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 AGAP1Q9UPQ3 857 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 GIT1Q9Y2X7 761 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 BZW2Q9Y6E2 419 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 ANK1P16157 1881 aa20.68■□□□□ 0.9
PDLIM2-204ENST00000397760 RCCD1A6NED2 376 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 PJA2O43164 708 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 CCDC172P0C7W6 258 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 TBXAS1P24557 533 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 ATICP31939 592 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 PRKCIP41743 596 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 CCL23P55773 120 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 CASP8Q14790 479 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 LRRC26Q2I0M4 334 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 AGMOQ6ZNB7 445 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 RNF169Q8NCN4 708 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 PGBD4Q96DM1 585 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 FTHL17Q9BXU8 183 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 XPOTO43592 962 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 ATF7P17544 494 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 MLH1P40692 756 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 PLEKHG4Q58EX7 1191 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 ECHDC2Q86YB7 292 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 FAM71AQ8IYT1 594 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 DBF4BQ8NFT6 615 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 SCLYQ96I15 445 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 NIF3L1Q9GZT8 377 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 TMEM39AQ9NV64 488 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 PCDHA13Q9Y5I0 950 aa20.67■□□□□ 0.9
PDLIM2-204ENST00000397760 ENC1O14682 589 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 CYP2C18P33260 490 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 KIF11P52732 1056 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 PTK2Q05397 1052 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 CCDC70Q6NSX1 233 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 SLC24A5Q71RS6 500 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 FAM71BQ8TC56 605 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 LINC01599Q8WXQ3 324 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 SEPT8Q92599 483 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 HPDLQ96IR7 371 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 RPS6KC1Q96S38 1066 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 MMS19Q96T76 1030 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 GAD1Q99259 594 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 WNT8AQ9H1J5 351 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 TBX21Q9UL17 535 aa20.66■□□□□ 0.9
PDLIM2-204ENST00000397760 C9IYK1 514 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 H3BQF6 201 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 PTGESO14684 152 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 AKR1B10O60218 316 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 PARNO95453 639 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 CLTBP09497 229 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 ASTE1Q2TB18 679 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF667Q5HYK9 610 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 ALS2CR12Q96Q35 445 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 TSPYL2Q9H2G4 693 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 RSAD1Q9HA92 442 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 UBN1Q9NPG3 1134 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 NXF1Q9UBU9 619 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 ADAM21Q9UKJ8 722 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 SNX12Q9UMY4 172 aa20.65■□□□□ 0.9
PDLIM2-204ENST00000397760 ARL5CA6NH57 179 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF263O14978 683 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 KRT5P13647 590 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 CYP3A5P20815 502 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 WDR72Q3MJ13 1102 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF571Q7Z3V5 609 aaPredicted RBP20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 ZNF598Q86UK7 904 aaKnown RBP20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 RNF10Q8N5U6 811 aaKnown RBP20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 GSTCDQ8NEC7 633 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 PPP1R10Q96QC0 940 aaKnown RBP20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 VRTNQ9H8Y1 702 aa20.64■□□□□ 0.9
PDLIM2-204ENST00000397760 CITO14578 2027 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 CYP26A1O43174 497 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 TCP1P17987 556 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 AARSP49588 968 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 AFF1P51825 1210 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 SOX4Q06945 474 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 HSP90B2PQ58FF3 399 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 C9orf57Q5W0N0 161 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 MMGT1Q8N4V1 131 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 APBB2Q92870 758 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 LUC7LQ9NQ29 371 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 MIOSQ9NXC5 875 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
PDLIM2-204ENST00000397760 STAU1O95793 577 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 THP07101 528 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 ACO1P21399 889 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 FAM189BP81408 668 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 MYO1EQ12965 1108 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 SCARA5Q6ZMJ2 495 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 FAM43BQ6ZT52 329 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 FAXDC2Q96IV6 333 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 SLC38A7Q9NVC3 462 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 PCDHB4Q9Y5E5 795 aa20.63■□□□□ 0.89
PDLIM2-204ENST00000397760 ENPP3O14638 875 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 PPEF2O14830 753 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 EOMESO95936 686 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 CXCL10P02778 98 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 ASPAP45381 313 aa20.62■□□□□ 0.89
PDLIM2-204ENST00000397760 SCNN1GP51170 649 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms