RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.12■■□□□ 1.29
NFIX-203ENST00000397661 KLF6Q99612 283 aaPredicted RBP23.12■■□□□ 1.29
NFIX-203ENST00000397661 ZWILCHQ9H900 591 aa23.12■■□□□ 1.29
NFIX-203ENST00000397661 ALG13Q9NP73 1137 aaKnown RBP23.12■■□□□ 1.29
NFIX-203ENST00000397661 SYNPO2Q9UMS6 1093 aa23.12■■□□□ 1.29
NFIX-203ENST00000397661 GOLGA8RI6L899 631 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 PSAPP07602 524 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 SRGAP2CP0DJJ0 459 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 GTF2H1P32780 548 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 CUL2Q13617 745 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 EMC2Q15006 297 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 SPDYCQ5MJ68 293 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 RHOT1Q8IXI2 618 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 SLC17A8Q8NDX2 589 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 MAGEC3Q8TD91 643 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 PPP1R16BQ96T49 567 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 C15orf41Q9Y2V0 281 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 CCDC189A1A4V9 331 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 PIK3R2O00459 728 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 MAGEA4P43358 317 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 CNTN2Q02246 1040 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 RHBDF2Q6PJF5 856 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 ST6GALNAC4Q9H4F1 302 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 PLA2G6O60733 806 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 DGAT1O75907 488 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 HIRAP54198 1017 aaPredicted RBP23.11■■□□□ 1.29
NFIX-203ENST00000397661 ITIH4Q14624 930 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 NIPA1Q7RTP0 329 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 ZBED8Q8IZ13 594 aa23.11■■□□□ 1.29
NFIX-203ENST00000397661 SGK1O00141 431 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 KCNA2P16389 499 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 GCKP35557 465 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 GCNT1Q02742 428 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 PTK6Q13882 451 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 SPATA21Q7Z572 469 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 FITM2Q8N6M3 262 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 EXTL3O43909 919 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 SUN1O94901 812 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 CCNHP51946 323 aaPredicted RBP23.1■■□□□ 1.29
NFIX-203ENST00000397661 NFX1Q12986 1120 aaKnown RBP23.1■■□□□ 1.29
NFIX-203ENST00000397661 ZACNQ401N2 412 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 MON1BQ7L1V2 547 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 GRK7Q8WTQ7 553 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 SERPINB12Q96P63 405 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 WRNIP1Q96S55 665 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 NXF1Q9UBU9 619 aaKnown RBP23.1■■□□□ 1.29
NFIX-203ENST00000397661 TJP2Q9UDY2 1190 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 NEU2Q9Y3R4 380 aa23.1■■□□□ 1.29
NFIX-203ENST00000397661 FOXN2P32314 431 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 TMEM132AQ24JP5 1023 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 C12orf50Q8NA57 414 aaPredicted RBP23.09■■□□□ 1.29
NFIX-203ENST00000397661 FBXL18Q96ME1 805 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 PLCD4Q9BRC7 762 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 KIAA1683Q9H0B3 1180 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 DEFB129Q9H1M3 183 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 TBC1D12O60347 775 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 C4BPAP04003 597 aaKnown RBP23.09■■□□□ 1.29
NFIX-203ENST00000397661 NOMO3P69849 1222 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 NCOA4Q13772 614 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 FAM83AQ86UY5 434 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 LPAR1Q92633 364 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 ZNF570Q96NI8 536 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 PITPNM3Q9BZ71 974 aa23.09■■□□□ 1.29
NFIX-203ENST00000397661 CD19P15391 556 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 PECAM1P16284 738 aaPredicted RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 RNASELQ05823 741 aaKnown RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 TRIM68Q6AZZ1 485 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 CRELD2Q6UXH1 353 aaPredicted RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 ABRAQ8N0Z2 381 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 CCDC89Q8N998 374 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 ZNF606Q8WXB4 792 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 ROPN1BQ9BZX4 212 aaPredicted RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 MTMR12Q9C0I1 747 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 ROPN1Q9HAT0 212 aaPredicted RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 COL4A5P29400 1685 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 CSDE1O75534 798 aaKnown RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 TFAMQ00059 246 aaKnown RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 PKN2Q16513 984 aaKnown RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 RTKN2Q8IZC4 609 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 MCPH1Q8NEM0 835 aa23.08■■□□□ 1.29
NFIX-203ENST00000397661 NSUN6Q8TEA1 469 aaKnown RBP23.08■■□□□ 1.29
NFIX-203ENST00000397661 MAPK13O15264 365 aa23.08■■□□□ 1.28
NFIX-203ENST00000397661 BZW1Q7L1Q6 419 aaKnown RBP23.08■■□□□ 1.28
NFIX-203ENST00000397661 LRRN4Q8WUT4 740 aa23.08■■□□□ 1.28
NFIX-203ENST00000397661 PCSK1NQ9UHG2 260 aa23.08■■□□□ 1.28
NFIX-203ENST00000397661 STBD1O95210 358 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 GJB1P08034 283 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 GLRA2P23416 452 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 TMEM132BQ14DG7 1078 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 CIAPIN1Q6FI81 312 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 MFSD5Q6N075 450 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 SAMD3Q8N6K7 520 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 JDP2Q8WYK2 163 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 CCDC77Q9BR77 488 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 KRT19P08727 400 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 ATP4AP20648 1035 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 CENPCQ03188 943 aa23.07■■□□□ 1.28
NFIX-203ENST00000397661 EFTUD2Q15029 972 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■■□□ 15.7
NFIX-203ENST00000397661 TCEAL1Q15170 157 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms