RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 GPIHBP1Q8IV16 184 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 TMX3Q96JJ7 454 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 ZFYVE19Q96K21 471 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 KMT5AQ9NQR1 393 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 GTSE1Q9NYZ3 720 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 E9PMD0 336 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 FOXD2O60548 495 aaPredicted RBP17.55■□□□□ 0.4
CUX2-202ENST00000397643 LRPAP1P30533 357 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 DUSP4Q13115 394 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 NBR1Q14596 966 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
CUX2-202ENST00000397643 TTC9BQ8N6N2 239 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 IGSF22Q8N9C0 903 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 TTC8Q8TAM2 541 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 TCHPQ9BT92 498 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 RXFP3Q9NSD7 469 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 LRWD1Q9UFC0 647 aa17.55■□□□□ 0.4
CUX2-202ENST00000397643 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
CUX2-202ENST00000397643 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
CUX2-202ENST00000397643 SLC16A4O15374 487 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 TOM1L1O75674 476 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 PRAMEF12O95522 483 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 CXCL8P10145 99 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 SPAG1Q07617 926 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 GPR17Q13304 367 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 PLD1Q13393 1074 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 PON2Q15165 354 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 SAFBQ15424 915 aaKnown RBP eCLIP17.54■□□□□ 0.4
CUX2-202ENST00000397643 SF3A2Q15428 464 aaKnown RBP17.54■□□□□ 0.4
CUX2-202ENST00000397643 ZBTB6Q15916 424 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 CENPPQ6IPU0 288 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 PKN3Q6P5Z2 889 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 C1orf186Q6ZWK4 172 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 KCNK18Q7Z418 384 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 CCDC83Q8IWF9 413 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 SNX29Q8TEQ0 813 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 DDX1Q92499 740 aaKnown RBP17.54■□□□□ 0.4
CUX2-202ENST00000397643 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 NTPCRQ9BSD7 190 aaKnown RBP17.54■□□□□ 0.4
CUX2-202ENST00000397643 HAPLN2Q9GZV7 340 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 ANKFY1Q9P2R3 1169 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 TSC2P49815 1807 aa17.54■□□□□ 0.4
CUX2-202ENST00000397643 MTMR11A4FU01 709 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 EXTL3O43909 919 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 MARCKSP29966 332 aaPredicted RBP17.53■□□□□ 0.4
CUX2-202ENST00000397643 EPHB3P54753 998 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 SHC2P98077 582 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
CUX2-202ENST00000397643 MCL1Q07820 350 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 TNK2Q07912 1038 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 BECN1Q14457 450 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 ARHGAP29Q52LW3 1261 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 N4BP2L1Q5TBK1 243 aaPredicted RBP17.53■□□□□ 0.4
CUX2-202ENST00000397643 CEP68Q76N32 757 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 SYNPOQ8N3V7 929 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 ATAD1Q8NBU5 361 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 PSMG2Q969U7 264 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 CHAMP1Q96JM3 812 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 OXCT2Q9BYC2 517 aaPredicted RBP17.53■□□□□ 0.4
CUX2-202ENST00000397643 FOXP1Q9H334 677 aaPredicted RBP17.53■□□□□ 0.4
CUX2-202ENST00000397643 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 OBP2AQ9NY56 170 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 ANGPTL2Q9UKU9 493 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 SLC27A5Q9Y2P5 690 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
CUX2-202ENST00000397643 TTC26A0AVF1 554 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 OR6C75A6NL08 312 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 PP2D1A8MPX8 630 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 SOAT2O75908 522 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 EPN2O95208 641 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 KCNA4P22459 653 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.4
CUX2-202ENST00000397643 RAP1GAPP47736 663 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 PDIA5Q14554 519 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 CCDC6Q16204 474 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 IL31Q6EBC2 164 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 DNAJB7Q7Z6W7 309 aaPredicted RBP17.52■□□□□ 0.4
CUX2-202ENST00000397643 TMEM161BQ8NDZ6 487 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 SPIRE2Q8WWL2 714 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 GAB3Q8WWW8 586 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 CHFRQ96EP1 664 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 LOXL4Q96JB6 756 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 TMEM209Q96SK2 561 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.4
CUX2-202ENST00000397643 EML5Q05BV3 1969 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 SFI1A8K8P3 1242 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 PPEF2O14830 753 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 AXIN1O15169 862 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 MAPTP10636 758 aaKnown RBP17.51■□□□□ 0.39
CUX2-202ENST00000397643 CYP3A5P20815 502 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 GABRR2P28476 465 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 WEE1P30291 646 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 GUCY2FP51841 1108 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 IL17AQ16552 155 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms