RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 WDR46O15213 610 aaKnown RBP5.75□□□□□ -1.49
PTPRD-205ENST00000397611 COMTP21964 271 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 BAG6P46379 1132 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 NSFP46459 744 aaKnown RBP5.75□□□□□ -1.49
PTPRD-205ENST00000397611 GALNTL6Q49A17 601 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 PLEKHA7Q6IQ23 1121 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 TLDC1Q6P9B6 456 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 NOP9Q86U38 636 aaKnown RBP5.75□□□□□ -1.49
PTPRD-205ENST00000397611 FNBP1Q96RU3 617 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 FEM1BQ9UK73 627 aa5.75□□□□□ -1.49
PTPRD-205ENST00000397611 POLRMTO00411 1230 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 KDM1AO60341 852 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 DNAJC3Q13217 504 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PHF13Q86YI8 300 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 RNF25Q96BH1 459 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 WDR35Q9P2L0 1181 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 SORCS3Q9UPU3 1222 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ECE1P42892 770 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ASPHQ12797 758 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MTFR1Q15390 333 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 SURF1Q15526 300 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 NSMFQ6X4W1 530 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 C15orf39Q6ZRI6 1047 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 FAM43BQ6ZT52 329 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF564Q8TBZ8 553 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PSPC1Q8WXF1 523 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 RXFP1Q9HBX9 757 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 LRRC4BQ9NT99 713 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MAGEA13PA6NCF6 341 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PLSCR1O15162 318 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CSDE1O75534 798 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 UNC5CO95185 931 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ZCCHC18P0CG32 403 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MCF2P10911 925 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PGM1P36871 562 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ELF3P78545 371 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 OCRLQ01968 901 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 EFHC2Q5JST6 749 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PRCCQ92733 491 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 THAP2Q9H0W7 228 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PALMDQ9NP74 551 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 C1orf112Q9NSG2 853 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 STARD13Q9Y3M8 1113 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 NUB1Q9Y5A7 615 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 XIRP1Q702N8 1843 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ROBO1Q9Y6N7 1651 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 FAM47DPA6NHR8 397 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 KLF11O14901 512 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CLIC2O15247 247 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ALOX15BO15296 676 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ECE2O60344 883 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ZFXP17010 805 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TARSP26639 723 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 VHLP40337 213 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 NCKAP1LP55160 1127 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYTH1Q15438 398 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 THEMIS2Q5TEJ8 643 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 RASSF3Q86WH2 238 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PPM1KQ8N3J5 372 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 SENP7Q9BQF6 1050 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC68Q9H2F9 335 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PDP2Q9P2J9 529 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 EMSYQ7Z589 1322 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PRPF4O43172 522 aaKnown RBP eCLIP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 FAM200BP0CF97 657 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MYL4P12829 197 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 EEF1B2P24534 225 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ATICP31939 592 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYP4A11Q02928 519 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 SIX1Q15475 284 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 HP1BP3Q5SSJ5 553 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 HELQQ8TDG4 1101 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ATP2A3Q93084 1043 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CFAP36Q96G28 342 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 LXNQ9BS40 222 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 PRDM16Q9HAZ2 1276 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 OSGEPQ9NPF4 335 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MAD1L1Q9Y6D9 718 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 COL5A3P25940 1745 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 DLATP10515 647 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CCNHP51946 323 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYLC2Q14093 348 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ACAP1Q15027 740 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ICA1LQ8NDH6 482 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 VPS11Q9H270 941 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CDC42EP4Q9H3Q1 356 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 FAM96AQ9H5X1 160 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYP4F11Q9HBI6 524 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM165Q9HC07 324 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CNOT8Q9UFF9 292 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 NHSQ6T4R5 1651 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 DHX15O43143 795 aaKnown RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 GRIN3BO60391 1043 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TGDSO95455 350 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CALB1P05937 261 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYP11B1P15538 503 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TMED10P49755 219 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms