RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CLCNKBP51801 687 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 LILRA4P59901 499 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 BMS1Q14692 1282 aaKnown RBP29.4■■■□□ 2.3
CPNE1-203ENST00000397442 MFSD5Q6N075 450 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 PAAF1Q9BRP4 392 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 PCDHB7Q9Y5E2 793 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 LTBP2Q14767 1821 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 CASTOR2A6NHX0 329 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 KPNA7A9QM74 516 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 YWHAEP62258 255 aaKnown RBP29.4■■■□□ 2.3
CPNE1-203ENST00000397442 TUSC3Q13454 348 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 UPP1Q16831 310 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 NOMO2Q5JPE7 1267 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 GLYCTKQ8IVS8 523 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 WHAMMQ8TF30 809 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 MMS19Q96T76 1030 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 PODXLO00592 558 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 ZSCAN12O43309 604 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 RPL9P32969 192 aaKnown RBP29.39■■■□□ 2.3
CPNE1-203ENST00000397442 PDE6CP51160 858 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 KRT83P78385 493 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 SV2CQ496J9 727 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 LIMS2Q7Z4I7 341 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 C3orf58Q8NDZ4 430 aa29.39■■■□□ 2.3
CPNE1-203ENST00000397442 FAM124BQ9H5Z6 455 aaPredicted RBP29.39■■■□□ 2.3
CPNE1-203ENST00000397442 B4GALT3O60512 393 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 CILPO75339 1184 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 BPIFB4P59827 614 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 INCA1Q0VD86 236 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 IKBKEQ14164 716 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 SPA17Q15506 151 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.38■■■□□ 2.291e-8■■□□□ 11.7
CPNE1-203ENST00000397442 VPS36Q86VN1 386 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 PALB2Q86YC2 1186 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 NAGPAQ9UK23 515 aa29.38■■■□□ 2.29
CPNE1-203ENST00000397442 FMO1Q01740 532 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 DSC1Q08554 894 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 SOWAHAQ2M3V2 549 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 RPUSD2Q8IZ73 545 aaKnown RBP29.37■■■□□ 2.29
CPNE1-203ENST00000397442 RABGGTAQ92696 567 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 TBC1D13Q9NVG8 400 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 HMGXB4Q9UGU5 601 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 PCDHA13Q9Y5I0 950 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 RCCD1A6NED2 376 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 IPO7O95373 1038 aaKnown RBP29.37■■■□□ 2.29
CPNE1-203ENST00000397442 MMEP08473 750 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 CDR2Q01850 454 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 ZNF394Q53GI3 561 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 TAF3Q5VWG9 929 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 ZNF280BQ86YH2 543 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 URGCPQ8TCY9 931 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 CASD1Q96PB1 797 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 TWNKQ96RR1 684 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 MRPL45Q9BRJ2 306 aaKnown RBP29.37■■■□□ 2.29
CPNE1-203ENST00000397442 TFR2Q9UP52 801 aa29.37■■■□□ 2.29
CPNE1-203ENST00000397442 CCP110O43303 1012 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 DDHD2O94830 711 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 TNFAIP3P21580 790 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 GATMP50440 423 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 RAD23BP54727 409 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 NPAS4Q8IUM7 802 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 TMEM199Q8N511 208 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 DDX27Q96GQ7 796 aaKnown RBP29.36■■■□□ 2.29
CPNE1-203ENST00000397442 PCDHB18PQ96TA0 734 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 KANSL3Q9P2N6 904 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 LRFN2Q9ULH4 789 aa29.36■■■□□ 2.29
CPNE1-203ENST00000397442 BARX2Q9UMQ3 279 aaPredicted RBP29.36■■■□□ 2.29
CPNE1-203ENST00000397442 ABL1P00519 1130 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 GNA15P30679 374 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 ALKBH5Q6P6C2 394 aaKnown RBP29.35■■■□□ 2.29
CPNE1-203ENST00000397442 CD300LGQ6UXG3 332 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 UROC1Q96N76 676 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 ZSWIM1Q9BR11 485 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 ELOVL4Q9GZR5 314 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 NME7Q9Y5B8 376 aa29.35■■■□□ 2.29
CPNE1-203ENST00000397442 ARHGAP25P42331 645 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 VAV2P52735 878 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 ZNF677Q86XU0 584 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 KBTBD7Q8WVZ9 684 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 FNDC1Q4ZHG4 1894 aaPredicted RBP29.34■■■□□ 2.29
CPNE1-203ENST00000397442 ABHD14A-ACY1A0A1B0GW23 586 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 MAGEA1P43355 309 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 AARSP49588 968 aaKnown RBP eCLIP29.34■■■□□ 2.29
CPNE1-203ENST00000397442 NDST1P52848 882 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 COLGALT2Q8IYK4 626 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 TTC39CQ8N584 583 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 SLC4A11Q8NBS3 891 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 LACRTQ9GZZ8 138 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 L1RE1Q9UN81 338 aa29.34■■■□□ 2.29
CPNE1-203ENST00000397442 HOXA2O43364 376 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 TACC1O75410 805 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 CCDC122Q5T0U0 273 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 ZNF662Q6ZS27 426 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 ABI1Q8IZP0 508 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 ZNF606Q8WXB4 792 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 TFAP2BQ92481 460 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 TAS2R14Q9NYV8 317 aa29.33■■■□□ 2.29
CPNE1-203ENST00000397442 PAEPP09466 180 aa29.32■■■□□ 2.28
CPNE1-203ENST00000397442 ORC1Q13415 861 aa29.32■■■□□ 2.28
CPNE1-203ENST00000397442 KIAA1328Q86T90 577 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms