RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PPEF2O14830 753 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 AMHP03971 560 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 FGFR1P11362 822 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 MFAP3P55082 362 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 TFF2Q03403 129 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 GRIK3Q13003 919 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 ARHGAP44Q17R89 818 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 ENOSF1Q7L5Y1 443 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 LRRC52Q8N7C0 313 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 SYN2Q92777 582 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 RC3H2Q9HBD1 1191 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 AIPL1Q9NZN9 384 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 COL4A6Q14031 1691 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 COL4A4P53420 1690 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 UPP2O95045 317 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 POMCP01189 267 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 PNMA6AP0CW24 399 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 CUL2Q13617 745 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 SFMBT2Q5VUG0 894 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 GLB1LQ6UWU2 654 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 NPAS4Q8IUM7 802 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 SHC3Q92529 594 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 FAXDC2Q96IV6 333 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 TGS1Q96RS0 853 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 ARID3AQ99856 593 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 NIF3L1Q9GZT8 377 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 INPP5FQ9Y2H2 1132 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 INSL6Q9Y581 213 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 PCDHB7Q9Y5E2 793 aa18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSPAN4-205ENST00000397406 FOXN3O00409 490 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 TBXAS1P24557 533 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 SOX5P35711 763 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 STAT1P42224 750 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 ZNF667Q5HYK9 610 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 NOMO2Q5JPE7 1267 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 UBR7Q8N806 425 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 JAKMIP2Q96AA8 810 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 ASB2Q96Q27 587 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 BAG1Q99933 345 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 THEGQ9P2T0 379 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 LRFN2Q9ULH4 789 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 POLIQ9UNA4 740 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 ACO1P21399 889 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 ASPAP45381 313 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 CDK17Q00537 523 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 TSR1Q2NL82 804 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 WDR72Q3MJ13 1102 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 TJAP1Q5JTD0 557 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 ATXN2LQ8WWM7 1075 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 CASD1Q96PB1 797 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 BCO2Q9BYV7 579 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 CACNG4Q9UBN1 327 aa18.15■□□□□ 0.5
TSPAN4-205ENST00000397406 CLSTN1O94985 981 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 MYO1EQ12965 1108 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 TUSC3Q13454 348 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 ASIC2Q16515 512 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 HGSNATQ68CP4 663 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 GPIHBP1Q8IV16 184 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 FAM71AQ8IYT1 594 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 URGCPQ8TCY9 931 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 ZNF560Q96MR9 790 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 CHP1Q99653 195 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 TBC1D13Q9NVG8 400 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 ZNHIT6Q9NWK9 470 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 ARHGAP20Q9P2F6 1191 aa18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 NXF1Q9UBU9 619 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-205ENST00000397406 TSC2P49815 1807 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 HOXA2O43364 376 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 B4GALT3O60512 393 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 GFPT2O94808 682 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 SKILP12757 684 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 FERP16591 822 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 RPL9P32969 192 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 PNPLA4P41247 253 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 PRKCIP41743 596 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 TAF6P49848 677 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 GATMP50440 423 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 CLCNKBP51801 687 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 DSC1Q08554 894 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 UPP1Q16831 310 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 CYP26C1Q6V0L0 522 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 SCARA5Q6ZMJ2 495 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 TMTC1Q8IUR5 882 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 ZNF689Q96CS4 500 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 SDCBP2Q9H190 292 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 KANSL3Q9P2N6 904 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 CNTN6Q9UQ52 1028 aa18.13■□□□□ 0.49
TSPAN4-205ENST00000397406 TTC28Q96AY4 2481 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 CASTOR2A6NHX0 329 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 PODXLO00592 558 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 SPTLC1O15269 473 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 SERPING1P05155 500 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms