RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 HSD17B4P51659 736 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SPARCL1Q14515 664 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 WASHC2DQ5SRD0 308 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 CAPRIN2Q6IMN6 1127 aaKnown RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DRICH1Q6PGQ1 229 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 FAM47EQ6ZV65 393 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 MON1BQ7L1V2 547 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 RHOT1Q8IXI2 618 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 FAM13CQ8NE31 585 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SLC38A10Q9HBR0 1119 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 KIAA1586Q9HCI6 787 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SSU72Q9NP77 194 aaKnown RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 FZD1Q9UP38 647 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 ABLIM1O14639 778 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SLC16A4O15374 487 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 QARSP47897 775 aaKnown RBP14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SATB1Q01826 763 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DNAJC3Q13217 504 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 TMED2Q15363 201 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 SV2AQ7L0J3 742 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 VSIG1Q86XK7 387 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 TMEM161BQ8NDZ6 487 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 EXD1Q8NHP7 514 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 C12orf42Q96LP6 360 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 OSBPL8Q9BZF1 889 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 KCNH7Q9NS40 1196 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 GRID1Q9ULK0 1009 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 TBX20Q9UMR3 447 aa14.1□□□□□ -0.15
TRIM40-207ENST00000396581 DNALI1O14645 258 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 TYROBPO43914 113 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 USP2O75604 605 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 GM2AP17900 193 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 CNGA1P29973 690 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 CCNHP51946 323 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 DGKZQ13574 1117 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 TAF11Q15544 211 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 ZC3H12AQ5D1E8 599 aaKnown RBP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 C15orf39Q6ZRI6 1047 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 PRUNE1Q86TP1 453 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 C4orf19Q8IY42 314 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 ARMC2Q8NEN0 867 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 ZNF398Q8TD17 642 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRIM40-207ENST00000396581 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 DOCK1Q14185 1865 aa14.09□□□□□ -0.15
TRIM40-207ENST00000396581 EXOC1LA0A1B0GW35 172 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 SKAP2O75563 359 aaPredicted RBP14.08□□□□□ -0.15
TRIM40-207ENST00000396581 ALDH3A1P30838 453 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 YWHABP31946 246 aaKnown RBP14.08□□□□□ -0.15
TRIM40-207ENST00000396581 VPS41P49754 854 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 RASSF2P50749 326 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 PEX3P56589 373 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 TAS2R40P59535 323 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 GHRHRQ02643 423 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 CYP24A1Q07973 514 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 SLC45A4Q5BKX6 768 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 USP37Q86T82 979 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 SULF1Q8IWU6 871 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 VCPIP1Q96JH7 1222 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 TBC1D10AQ9BXI6 508 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 TRABDQ9H4I3 376 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.15
TRIM40-207ENST00000396581 AGO4Q9HCK5 861 aaKnown RBP14.08□□□□□ -0.15
TRIM40-207ENST00000396581 HAO1Q9UJM8 370 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 UBIAD1Q9Y5Z9 338 aa14.08□□□□□ -0.15
TRIM40-207ENST00000396581 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 C2CD2LO14523 706 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 LIASO43766 372 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 ZBED4O75132 1171 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 TARSP26639 723 aaKnown RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 P3H1Q32P28 736 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 C11orf91Q3C1V1 193 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 PCNX4Q63HM2 1172 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SLC39A4Q6P5W5 647 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SAAL1Q96ER3 474 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 NTPCRQ9BSD7 190 aaKnown RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 HEMGNQ9BXL5 484 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SLCO1B3Q9NPD5 702 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SAR1AQ9NR31 198 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
TRIM40-207ENST00000396581 ZFATQ9P243 1243 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 FETUBQ9UGM5 382 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 SLC24A2Q9UI40 661 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.16
TRIM40-207ENST00000396581 ALOX15BO15296 676 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms