RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CYP2B6P20813 491 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 GGCXP38435 758 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 SLC1A1P43005 524 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 TSEN2Q8NCE0 465 aaKnown RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 UTP11Q9Y3A2 253 aaKnown RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 TRPM7Q96QT4 1865 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 LACTBP83111 547 aaPredicted RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 DR1Q01658 176 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 PTP4A2Q12974 167 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 MAMLD1Q13495 774 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 DDX42Q86XP3 938 aaKnown RBP eCLIP12.91□□□□□ -0.34
ITGB1-202ENST00000396033 ACAP3Q96P50 834 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 PHF2O75151 1096 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 TMEM35BQ8NCS4 154 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 PLVAPQ9BX97 442 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 CEP83Q9Y592 693 aa12.91□□□□□ -0.34
ITGB1-202ENST00000396033 PROSCO94903 275 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 CD19P15391 556 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 MMP8P22894 467 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 IRF5Q13568 498 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 MFSD10Q14728 455 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 RGMBQ6NW40 437 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 TFAP2BQ92481 460 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 KAT2BQ92831 832 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 GCOM2Q9BZD3 368 aaPredicted RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 HSF2BPO75031 334 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 CALB1P05937 261 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 DCAF4L1Q3SXM0 396 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 EIF1ADQ8N9N8 165 aaKnown RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.9□□□□□ -0.34
ITGB1-202ENST00000396033 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 DPH5Q9H2P9 285 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 ADAMTS10Q9H324 1103 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
ITGB1-202ENST00000396033 BHMG1C9JSJ3 638 aaPredicted RBP12.9□□□□□ -0.35
ITGB1-202ENST00000396033 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.35
ITGB1-202ENST00000396033 DAPK3O43293 454 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 RNF40O75150 1001 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 GJB6O95452 261 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 NPTXRO95502 500 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 CYP2C9P11712 490 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 RGS2P41220 211 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 CDH8P55286 799 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 C17orf99Q6UX52 265 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 CATSPER4Q7RTX7 472 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 IFNL1Q8IU54 200 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 PRELID2Q8N945 189 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.9□□□□□ -0.35
ITGB1-202ENST00000396033 C18orf8Q96DM3 657 aa12.9□□□□□ -0.35
ITGB1-202ENST00000396033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.9□□□□□ -0.35
ITGB1-202ENST00000396033 AGPSO00116 658 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 MYL3P08590 195 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 ECHS1P30084 290 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 ATICP31939 592 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 CHRNA3P32297 505 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 DHX34Q14147 1143 aaKnown RBP12.89□□□□□ -0.35
ITGB1-202ENST00000396033 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 MAGOHBQ96A72 148 aaKnown RBP12.89□□□□□ -0.35
ITGB1-202ENST00000396033 OSMRQ99650 979 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 TRIM31Q9BZY9 425 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
ITGB1-202ENST00000396033 PCDHGC3Q9UN70 934 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 TCRBV7S2A1N4TA0A589 114 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 P4HA1P13674 534 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 GRM5P41594 1212 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 CPT1AP50416 773 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 ORC1Q13415 861 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 SAPCD2Q86UD0 394 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 FEZF2Q8TBJ5 459 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 USP6NLQ92738 828 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 APBA2Q99767 749 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 ZNF518BQ9C0D4 1074 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
ITGB1-202ENST00000396033 USTQ9Y2C2 406 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms