RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KAT6AQ92794 2004 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ITGA4P13612 1032 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 GUCY1A2P33402 732 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 SCARF1Q14162 830 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 NAPEPLDQ6IQ20 393 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 RANBP17Q9H2T7 1088 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MLXIPLQ9NP71 852 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PKP3Q9Y446 797 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ARHGEF9O43307 516 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ZBTB7AO95365 584 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 CETPP11597 493 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MRPS25P82663 173 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 VPS72Q15906 364 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 AARS2Q5JTZ9 985 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 DDX53Q86TM3 631 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 HPDLQ96IR7 371 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MS4A14Q96JA4 679 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 CLMNQ96JQ2 1002 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 KCNK16Q96T55 309 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 GID8Q9NWU2 228 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 NMRK1Q9NWW6 199 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 AURKCQ9UQB9 309 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 INO80Q9ULG1 1556 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PPP1R37O75864 691 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 PDHA1P08559 390 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 STIP1P31948 543 aaKnown RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ANKRD13AQ8IZ07 590 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC1Q9BTT6 524 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 TASP1Q9H6P5 420 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 WDCPQ9H6R7 721 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 MYOZ2Q9NPC6 264 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 SH3BP1Q9Y3L3 701 aa5.71□□□□□ -1.5
VPS13C-204ENST00000395898 USP15Q9Y4E8 981 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-204ENST00000395898 ESYT3A0FGR9 886 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 VGLL3A8MV65 326 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 FAM200BP0CF97 657 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CENPPQ6IPU0 288 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 RNF180Q86T96 592 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CLEC4FQ8N1N0 589 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TFB1MQ8WVM0 346 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF512Q96ME7 567 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 LBHD1Q9BQE6 289 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AAASQ9NRG9 546 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 LATS2Q9NRM7 1088 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SMARCAL1Q9NZC9 954 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NCK2O43639 380 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NCAM1P13591 858 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PRKCEQ02156 737 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC14Q15048 493 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TRPC7Q9HCX4 862 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NPHS2Q9NP85 383 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 C20orf96Q9NUD7 363 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MPP6Q9NZW5 540 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 APPL1Q9UKG1 709 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ANXA9O76027 345 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MTA1Q13330 715 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 EMC2Q15006 297 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ACBD5Q5T8D3 534 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CD302Q8IX05 232 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TEX9Q8N6V9 391 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SLC7A14Q8TBB6 771 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 OPTNQ96CV9 577 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM161AQ9NX61 479 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 HACL1Q9UJ83 578 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MTO1Q9Y2Z2 717 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CFAP99D6REC4 459 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SSTR3P32745 418 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NEK2P51955 445 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SFSWAPQ12872 951 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 STX3Q13277 289 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 USP10Q14694 798 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 FAM9CQ8IZT9 166 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 RBBP8NLQ8NC74 664 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 FEZF2Q8TBJ5 459 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM143Q96AN5 459 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ERP44Q9BS26 406 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NAT9Q9BTE0 207 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 OSBPL8Q9BZF1 889 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SPON1Q9HCB6 807 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AGPAT5Q9NUQ2 364 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 C2orf81A6NN90 581 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 C5orf58C9J3I9 102 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PSTPIP1O43586 416 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ATXN8OSP0DMR3 200 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 HLA-DPA1P20036 260 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 FDFT1P37268 417 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 DAB2P98082 770 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 FOXD4Q12950 439 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 DMC1Q14565 340 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TAF1CQ15572 869 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TTLL9Q3SXZ7 439 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PTRHD1Q6GMV3 140 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 GSPT2Q8IYD1 628 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms