RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 ZNF446Q9NWS9 450 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 CNTN6Q9UQ52 1028 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 IPPQ9Y573 584 aa16.17■□□□□ 0.18
SCAF11-204ENST00000395454 ENPP3O14638 875 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 ZRANB2O95218 330 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCAF11-204ENST00000395454 TNNI1P19237 187 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 SURF1Q15526 300 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 C16orf59Q7L2K0 433 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 TATDN2Q93075 761 aa16.16■□□□□ 0.18
SCAF11-204ENST00000395454 TARSL2A2RTX5 802 aaKnown RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 MTA2O94776 668 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 CYP11B1P15538 503 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 TNFSF9P41273 254 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 RGS19P49795 217 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 RAB27AP51159 221 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 EPHB4P54760 987 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 NAP1L1P55209 391 aaKnown RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 FMO1Q01740 532 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 CDR2Q01850 454 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 BRD3Q15059 726 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 WDR93Q6P2C0 686 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 ZNF365Q70YC5 407 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 SLC47A2Q86VL8 602 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 SMG8Q8ND04 991 aaKnown RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 HNRNPLLQ8WVV9 542 aaKnown RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 CTNNBL1Q8WYA6 563 aaPredicted RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 TRAIPQ9BWF2 469 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 SNTG2Q9NY99 539 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 ABHD14A-ACY1A0A1B0GW23 586 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 C9IYK1 514 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 CYP26A1O43174 497 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 NCK2O43639 380 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 RTN2O75298 545 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 FGBP02675 491 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 SKIP12755 728 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 AKAP5P24588 427 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 MAGEA10P43363 369 aaPredicted RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 PSRC1Q6PGN9 363 aaPredicted RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 SYCE1Q8N0S2 351 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 MMGT1Q8N4V1 131 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.186e-7■□□□□ 11.3
SCAF11-204ENST00000395454 CCDC94Q9BW85 323 aaPredicted RBP16.15■□□□□ 0.18
SCAF11-204ENST00000395454 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
SCAF11-204ENST00000395454 CITO14578 2027 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 TTC3P53804 2025 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
SCAF11-204ENST00000395454 PIK3CAP42336 1068 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 WDR44Q5JSH3 913 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 FAM43BQ6ZT52 329 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-204ENST00000395454 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 RHOT2Q8IXI1 618 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 HACE1Q8IYU2 909 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 OR5B17Q8NGF7 314 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 LPPQ93052 612 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 CAPZA3Q96KX2 299 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 ACAP3Q96P50 834 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 FAM53CQ9NYF3 392 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 PARP2Q9UGN5 583 aa16.14■□□□□ 0.17
SCAF11-204ENST00000395454 MEIS3P2A8K0S8 358 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ZNF623O75123 536 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 BAIAP3O94812 1187 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 KIF4AO95239 1232 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 FTCDO95954 541 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ASS1P00966 412 aaKnown RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 CXCL8P10145 99 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 TBXAS1P24557 533 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 GRM5P41594 1212 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 PDE6CP51160 858 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 TMEM240Q5SV17 173 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 UBR7Q8N806 425 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 SLC35G2Q8TBE7 412 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 RUBCNQ92622 972 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 PNKPQ96T60 521 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 PI4K2AQ9BTU6 479 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 APOBEC3GQ9HC16 384 aaKnown RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 H0YGN5 161 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ATP8B1O43520 1251 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 EFCAB14O75071 495 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 RECQL4O94761 1208 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 UPP2O95045 317 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 CLTAP09496 248 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ITGA4P13612 1032 aa16.13■□□□□ 0.17
SCAF11-204ENST00000395454 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-204ENST00000395454 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms