RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 ACTR2P61160 394 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 MTM1Q13496 603 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 CCNG2Q16589 344 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 FKBP1CQ5VVH2 108 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 SNRNP48Q6IEG0 339 aaKnown RBP21.84■■□□□ 1.09
CLK3-202ENST00000395066 SYDE1Q6ZW31 735 aaPredicted RBP21.84■■□□□ 1.09
CLK3-202ENST00000395066 MAIP1Q8WWC4 291 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 TARS2Q9BW92 718 aaKnown RBP21.84■■□□□ 1.09
CLK3-202ENST00000395066 JPH1Q9HDC5 661 aaPredicted RBP21.84■■□□□ 1.09
CLK3-202ENST00000395066 RBAKQ9NYW8 714 aaPredicted RBP21.84■■□□□ 1.09
CLK3-202ENST00000395066 PRKAG3Q9UGI9 489 aa21.84■■□□□ 1.09
CLK3-202ENST00000395066 POC1B-GALNT4F8VUJ3 575 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 DIAPH2O60879 1101 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 MYBL1P10243 752 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 MAN1A1P33908 653 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 MAGEA4P43358 317 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 PSMD6Q15008 389 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 ABRAQ8N0Z2 381 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 TTLL6Q8N841 843 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.83■■□□□ 1.09
CLK3-202ENST00000395066 ASAP3Q8TDY4 903 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 FAM81BQ96LP2 452 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 TEPSINQ96N21 525 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 C10orf88Q9H8K7 445 aa21.83■■□□□ 1.09
CLK3-202ENST00000395066 MSH2P43246 934 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 MAP3K10Q02779 954 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 FAM182AQ5T1J6 154 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 LIN9Q5TKA1 542 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 ASRGL1Q7L266 308 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 TAB3Q8N5C8 712 aaPredicted RBP21.83■■□□□ 1.08
CLK3-202ENST00000395066 CCDC89Q8N998 374 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 ANKLE1Q8NAG6 615 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 ZNF570Q96NI8 536 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 MYOZ2Q9NPC6 264 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 ARID2Q68CP9 1835 aa21.83■■□□□ 1.08
CLK3-202ENST00000395066 ZC3H11AO75152 810 aaKnown RBP eCLIP21.82■■□□□ 1.08
CLK3-202ENST00000395066 CDH16O75309 829 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 WDR4P57081 412 aaKnown RBP21.82■■□□□ 1.08
CLK3-202ENST00000395066 PTP4A2Q12974 167 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 MFSD7Q6UXD7 560 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 MCPH1Q8NEM0 835 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 ZNF148Q9UQR1 794 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 TTLL13PA6NNM8 815 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 F8VP50 259 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 PSTPIP1O43586 416 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 GCAP28676 217 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 POLGP54098 1239 aaPredicted RBP21.82■■□□□ 1.08
CLK3-202ENST00000395066 SP2Q02086 613 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 NFX1Q12986 1120 aaKnown RBP21.82■■□□□ 1.08
CLK3-202ENST00000395066 EMC2Q15006 297 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 PRAMEF18Q5VWM3 479 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 BZW1Q7L1Q6 419 aaKnown RBP21.82■■□□□ 1.08
CLK3-202ENST00000395066 KATNAL2Q8IYT4 538 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 TRIM11Q96F44 468 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 NKIRAS1Q9NYS0 192 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 SLC9A2Q9UBY0 812 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 IVNS1ABPQ9Y6Y0 642 aa21.82■■□□□ 1.08
CLK3-202ENST00000395066 GOLGA8SH3BPF8 625 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 GOLGA8MH3BSY2 632 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 PSAPP07602 524 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 NOP14P78316 857 aaKnown RBP21.81■■□□□ 1.08
CLK3-202ENST00000395066 CAV1Q03135 178 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 ZNF252P-AS1Q0IIN9 211 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 MKRN3Q13064 507 aaKnown RBP21.81■■□□□ 1.08
CLK3-202ENST00000395066 ZNF677Q86XU0 584 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 C4orf33Q8N1A6 199 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 C17orf75Q9HAS0 396 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 FBXO40Q9UH90 709 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 EXOC1LA0A1B0GW35 172 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 CCDC189A1A4V9 331 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 TAC1P20366 129 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 ATP4AP20648 1035 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 FSTL1Q12841 308 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 PLEKHA7Q6IQ23 1121 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 ERICH1Q86X53 443 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 MCEEQ96PE7 176 aa21.81■■□□□ 1.08
CLK3-202ENST00000395066 SAE1Q9UBE0 346 aaPredicted RBP21.81■■□□□ 1.08
CLK3-202ENST00000395066 PEX10O60683 326 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 KRT1P04264 644 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 PECAM1P16284 738 aaPredicted RBP21.8■■□□□ 1.08
CLK3-202ENST00000395066 ARSEP51690 589 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 LACTBP83111 547 aaPredicted RBP21.8■■□□□ 1.08
CLK3-202ENST00000395066 OGDHQ02218 1023 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 STRN3Q13033 797 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 DNAJC3Q13217 504 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 ECHDC2Q86YB7 292 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 GPRASP2Q96D09 838 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 MSTO1Q9BUK6 570 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 SLCO1B3Q9NPD5 702 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 EURLQ9NYK6 297 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 KLHL14Q9P2G3 628 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 LGALS13Q9UHV8 139 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 ZNRF3Q9ULT6 936 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 LIASO43766 372 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 BPIFB4P59827 614 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 CLDN10P78369 228 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 GAD2Q05329 585 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 GPS1Q13098 491 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 NIM1KQ8IY84 436 aa21.8■■□□□ 1.08
CLK3-202ENST00000395066 EXD1Q8NHP7 514 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms