RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 EXOC3L1Q86VI1 746 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 TMEM143Q96AN5 459 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 PHTF1Q9UMS5 762 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SUFUQ9UMX1 484 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 TMEM150BA6NC51 233 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 MAFGO15525 162 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ZBED1O96006 694 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 XRCC4Q13426 336 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 STXBP2Q15833 593 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 MAPK6Q16659 721 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 BSPRYQ5W0U4 402 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 NPHS2Q9NP85 383 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 HOXD13P35453 343 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 EMC2Q15006 297 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 LVRNQ6Q4G3 990 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 MAP4K3Q8IVH8 894 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 CKAP2Q8WWK9 683 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 CCT6BQ92526 530 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 BCAS3Q9H6U6 928 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 CFAP69A5D8W1 941 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 C5orf60A6NFR6 353 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 H0YGN5 161 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 GOLGA8RI6L899 631 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 DNM1LO00429 736 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 FSCN2O14926 492 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 KRT10P13645 584 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 CAPRIN2Q6IMN6 1127 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 SPDL1Q96EA4 605 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 PCDHB18PQ96TA0 734 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 CYTH2Q99418 400 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MAP3K20Q9NYL2 800 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 NFS1Q9Y697 457 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ECM29Q5VYK3 1845 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 OPLAHO14841 1288 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 KRT3P12035 628 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 PTGER2P43116 358 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 TMPRSS15P98073 1019 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 CRYMQ14894 314 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 CDKL2Q92772 493 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ADPGKQ9BRR6 497 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 CTNNAL1Q9UBT7 734 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MTMR2Q13614 643 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 LONP2Q86WA8 852 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 RPF1Q9H9Y2 349 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ZDHHC18Q9NUE0 388 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ASNSD1Q9NWL6 643 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 SMIM24O75264 130 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MMP14P50281 582 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 MCL1Q07820 350 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 TTC27Q6P3X3 843 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 PPM1NQ8N819 430 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 PPARGC1AQ9UBK2 798 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
UBE2D3-209ENST00000394804 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 PTGIRP43119 386 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 SLC8A3P57103 927 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 EIF3EP60228 445 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 MORF4L2Q15014 288 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 KREMEN1Q96MU8 473 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 KLC2Q9H0B6 622 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 805.7 ms