RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 UNGP13051 313 aaPredicted RBP9.21□□□□□ -0.93
TDP1-203ENST00000393454 KCNE1P15382 129 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 ATF7P17544 494 aaPredicted RBP9.21□□□□□ -0.93
TDP1-203ENST00000393454 CXCR5P32302 372 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 LPIN1Q14693 890 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 RPS6KA1Q15418 735 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 TEX35Q5T0J7 233 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 MEI1Q5TIA1 1274 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 PHLDB2Q86SQ0 1253 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 RNF169Q8NCN4 708 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 FAXDC2Q96IV6 333 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 OSBPL9Q96SU4 736 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 TLR10Q9BXR5 811 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 VRTNQ9H8Y1 702 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 CNOT8Q9UFF9 292 aaKnown RBP9.21□□□□□ -0.93
TDP1-203ENST00000393454 COG5Q9UP83 839 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 PTPN22Q9Y2R2 807 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 SNX9Q9Y5X1 595 aa9.21□□□□□ -0.93
TDP1-203ENST00000393454 FRMPD3Q5JV73 1810 aa9.21□□□□□ -0.94
TDP1-203ENST00000393454 PDCD11Q14690 1871 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 CTAGE15A4D2H0 777 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ARVCFO00192 962 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 BUB1BO60566 1050 aaPredicted RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 TADA3O75528 432 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CYP1A1P04798 512 aaPredicted RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 CTAGE8P0CG41 777 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TCP1P17987 556 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 CKAP4Q07065 602 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TRIM71Q2Q1W2 868 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 C2CD6Q53TS8 623 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 LIN9Q5TKA1 542 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 DPH6Q7L8W6 267 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CTAGE6Q86UF2 777 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CTAGE4Q8IX94 777 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 MCOLN2Q8IZK6 566 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 LRRC57Q8N9N7 239 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 GOLGA1Q92805 767 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 LPPQ93052 612 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TRIM11Q96F44 468 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 DEFB118Q96PH6 123 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 RPS6KC1Q96S38 1066 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TSPAN18Q96SJ8 248 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 NUP85Q9BW27 656 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 GOLGA2P5Q9HBQ8 144 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ERVK-5Q9HDB9 667 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 GTF3C4Q9UKN8 822 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 AMFRQ9UKV5 643 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 PHF24Q9UPV7 400 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 SCN1AP35498 2009 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 HTTP42858 3142 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 MEIS3P2A8K0S8 358 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 MED7O43513 233 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CILPO75339 1184 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 STAU1O95793 577 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 CYP1A2P05177 515 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CKBP12277 381 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 PRLRP16471 622 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 NDST1P52848 882 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 RAD23BP54727 409 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 NOMO3P69849 1222 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 CENPCQ03188 943 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 MTFR1Q15390 333 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ELF2Q15723 593 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 XKR4Q5GH76 650 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 FAM26DQ5JW98 314 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 LRRC52Q8N7C0 313 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ZNF564Q8TBZ8 553 aaPredicted RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 COG1Q8WTW3 980 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TFAP2BQ92481 460 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 TMEM176AQ96HP8 235 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 HEXIM2Q96MH2 286 aaKnown RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ZNF560Q96MR9 790 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 GAD1Q99259 594 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ELOVL4Q9GZR5 314 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 RNF208Q9H0X6 261 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 ADAM22Q9P0K1 906 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 HMGXB4Q9UGU5 601 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 BARX2Q9UMQ3 279 aaPredicted RBP9.2□□□□□ -0.94
TDP1-203ENST00000393454 CEP83Q9Y592 693 aa9.2□□□□□ -0.94
TDP1-203ENST00000393454 KCNK3O14649 394 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 KIF4AO95239 1232 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PAEPP09466 180 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MYBL1P10243 752 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MLH1P40692 756 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SOX4Q06945 474 aaPredicted RBP9.19□□□□□ -0.94
TDP1-203ENST00000393454 MESDQ14696 234 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PPP1R2P3Q6NXS1 205 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MMS22LQ6ZRQ5 1243 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SLFN11Q7Z7L1 901 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 TTC39CQ8N584 583 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SLC4A11Q8NBS3 891 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 C1orf131Q8NDD1 294 aaKnown RBP9.19□□□□□ -0.94
TDP1-203ENST00000393454 CALR3Q96L12 384 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms