RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 TBC1D14Q9P2M4 693 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 H0Y3Z8 333 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 ADH1CP00326 375 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 RETP07949 1114 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF18P17022 549 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 POU3F3P20264 500 aaPredicted RBP8.62□□□□□ -1.03
LIMS1-203ENST00000393310 INHBCP55103 352 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 EVCP57679 992 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 RESTQ13127 1097 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 PGM5Q15124 567 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 ADALQ6DHV7 355 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 SLC30A10Q6XR72 485 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 FANCBQ8NB91 859 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 RNF139Q8WU17 664 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 DNASE1L2Q92874 299 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 DHTKD1Q96HY7 919 aaPredicted RBP8.62□□□□□ -1.03
LIMS1-203ENST00000393310 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 FAM129AQ9BZQ8 928 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 SFI1A8K8P3 1242 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 KRT19P08727 400 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 SFTPCP11686 197 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 PDE1AP54750 535 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 SPIRE1Q08AE8 756 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 PLEKHG4Q58EX7 1191 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 C10orf62Q5T681 223 aaPredicted RBP8.62□□□□□ -1.03
LIMS1-203ENST00000393310 EMC10Q5UCC4 262 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 C15orf39Q6ZRI6 1047 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 METTL16Q86W50 562 aaKnown RBP8.62□□□□□ -1.03
LIMS1-203ENST00000393310 TEKT4Q8WW24 435 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 MOCOSQ96EN8 888 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 CORO1BQ9BR76 489 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.62□□□□□ -1.03
LIMS1-203ENST00000393310 PCSK1NQ9UHG2 260 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 CDH7Q9ULB5 785 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 ADAMTS5Q9UNA0 930 aa8.62□□□□□ -1.03
LIMS1-203ENST00000393310 NFASCO94856 1347 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TRAV19A0A0A6YYK7 116 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 LILRB3O75022 631 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ARHGAP25P42331 645 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PCYT1AP49585 367 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 OLR1P78380 273 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 RAD51Q06609 339 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF568Q3ZCX4 644 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TPGS2Q68CL5 300 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 DSG4Q86SJ6 1040 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 STX12Q86Y82 276 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 C8orf76Q96K31 380 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 AASDHPPTQ9NRN7 309 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 COMMD8Q9NX08 183 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 GDE1Q9NZC3 331 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TOGARAM1Q9Y4F4 1720 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 OR6C75A6NL08 312 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 KLHL41O60662 606 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 GLULP15104 373 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ABCB4P21439 1286 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 MCM2P49736 904 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 RCAN1P53805 252 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PPP1R14CQ8TAE6 165 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 SMC6Q96SB8 1091 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 CDK5RAP1Q96SZ6 601 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 CDC6Q99741 560 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 DDX23Q9BUQ8 820 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ADAMTS10Q9H324 1103 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 KMT5AQ9NQR1 393 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 FAM114A2Q9NRY5 505 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 TYW1Q9NV66 732 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 HESX1Q9UBX0 185 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 FAF1Q9UNN5 650 aaPredicted RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 DICER1Q9UPY3 1922 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 CCDC195A0A1B0GUA6 201 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 C8AP07357 584 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 GDI1P31150 447 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 AGAP9Q5VTM2 703 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ATCAYQ86WG3 371 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 COPS5Q92905 334 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 YIPF3Q9GZM5 350 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 PUS7LQ9H0K6 701 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 MAN1C1Q9NR34 630 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 AXIN1O15169 862 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 MGEA5O60502 916 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 KRT14P02533 472 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 CREB5Q02930 508 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 DHX8Q14562 1220 aaKnown RBP8.61□□□□□ -1.03
LIMS1-203ENST00000393310 EPHA7Q15375 998 aa8.61□□□□□ -1.03
LIMS1-203ENST00000393310 DUSP6Q16828 381 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms