RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 RXRAP19793 462 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 KPNA1P52294 538 aaPredicted RBP8.74□□□□□ -1.01
CASP4-201ENST00000393150 STPG1Q5TH74 334 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 RNF43Q68DV7 783 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 HEATR6Q6AI08 1181 aaKnown RBP8.74□□□□□ -1.01
CASP4-201ENST00000393150 WWC2Q6AWC2 1192 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 NOTUMQ6P988 496 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 LILRA6Q6PI73 481 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 LRSAM1Q6UWE0 723 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 TMTC3Q6ZXV5 915 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 TAS1R1Q7RTX1 841 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 MIER3Q7Z3K6 550 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 CHD1LQ86WJ1 897 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 REXO1Q8N1G1 1221 aaKnown RBP8.74□□□□□ -1.01
CASP4-201ENST00000393150 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 FEZF2Q8TBJ5 459 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 E2F7Q96AV8 911 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 GAD1Q99259 594 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 RIT2Q99578 217 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 KLF15Q9UIH9 416 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 FBXW11Q9UKB1 542 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 COL4A3BPQ9Y5P4 624 aa8.74□□□□□ -1.01
CASP4-201ENST00000393150 C2orf16Q68DN1 1984 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 RALGAPA1Q6GYQ0 2036 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 F5P12259 2224 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 CHURC1-FNTBB4DL54 471 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 ZNF263O14978 683 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 PHACTR2O75167 634 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 PRPF40AO75400 957 aaKnown RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 NEFLP07196 543 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 POU2F2P09086 479 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 CCDC192P0DO97 292 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 PTPN2P17706 415 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 FNTBP49356 437 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 NOVA1P51513 510 aaKnown RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 TFDP1Q14186 410 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 PSMD5Q16401 504 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 CYP4A22Q5TCH4 519 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 FAM171A1Q5VUB5 890 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 IQCEQ6IPM2 695 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 OTUD6AQ7L8S5 288 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 HAUS6Q7Z4H7 955 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 ITFG1Q8TB96 612 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 SLC7A14Q8TBB6 771 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 BHMTQ93088 406 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 MCRS1Q96EZ8 462 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 MBOAT7Q96N66 472 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 LSM14BQ9BX40 385 aaKnown RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 C22orf23Q9BZE7 217 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 ARRDC1-AS1Q9H2J1 176 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 C8orf33Q9H7E9 229 aaPredicted RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 MARCH5Q9NX47 278 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 ANKFY1Q9P2R3 1169 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 NAP1L2Q9ULW6 460 aaPredicted RBP8.73□□□□□ -1.01
CASP4-201ENST00000393150 PCDHGA5Q9Y5G8 931 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 PIAS3Q9Y6X2 628 aa8.73□□□□□ -1.01
CASP4-201ENST00000393150 DOCK8Q8NF50 2099 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 PRRG1O14668 218 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 TRAPPC3O43617 180 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 MARCH6O60337 910 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 MAFO75444 373 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 PSMC3P17980 439 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 RPL17P18621 184 aaKnown RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 MLH1P40692 756 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 SCNN1GP51170 649 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 NTHL1P78549 312 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 FGD1P98174 961 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 GRIK3Q13003 919 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 MXD4Q14582 209 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 PTPAQ15257 358 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 ELF2Q15723 593 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 RNFT1Q5M7Z0 435 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 TTC39BQ5VTQ0 682 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 PPP4R3AQ6IN85 833 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 PDZD4Q76G19 769 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 MB21D2Q8IYB1 491 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 DEPDC1BQ8WUY9 529 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 ING5Q8WYH8 240 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 EXOC4Q96A65 974 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 DUSP9Q99956 384 aaKnown RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 SLKQ9H2G2 1235 aaPredicted RBP8.72□□□□□ -1.01
CASP4-201ENST00000393150 TRPV5Q9NQA5 729 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 VPS45Q9NRW7 570 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 PARP2Q9UGN5 583 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 IPPQ9Y573 584 aa8.72□□□□□ -1.01
CASP4-201ENST00000393150 IGLV3-22A0A075B6J6 115 aa8.71□□□□□ -1.02
CASP4-201ENST00000393150 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
CASP4-201ENST00000393150 SH2B2O14492 632 aaPredicted RBP8.71□□□□□ -1.02
CASP4-201ENST00000393150 ZBTB43O43298 467 aa8.71□□□□□ -1.02
CASP4-201ENST00000393150 ZNF862O60290 1169 aa8.71□□□□□ -1.02
CASP4-201ENST00000393150 ATG13O75143 517 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms