RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 MCOLN2Q8IZK6 566 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 PPFIBP2Q8ND30 876 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 PYROXD1Q8WU10 500 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 SHC3Q92529 594 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 P3H4Q92791 437 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 SEC16BQ96JE7 1060 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 M0QYV0 167 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 MCF2LO15068 1137 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 ZNF862O60290 1169 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 GRAP2O75791 330 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 CLCN3P51790 818 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 MYL6P60660 151 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 IL9RQ01113 521 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 KCNT1Q5JUK3 1230 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 ARHGEF18Q6ZSZ5 1173 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 LRRC8CQ8TDW0 803 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 FAM149B1Q96BN6 582 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 GINM1Q9NU53 330 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 HEY1Q9Y5J3 304 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 ARAP2Q8WZ64 1704 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 MED7O43513 233 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 GNAT1P11488 350 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 KRT3P12035 628 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 TNFRSF8P28908 595 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 PPP2R5DQ14738 602 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 ARMC9Q7Z3E5 817 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 ZC3H18Q86VM9 953 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 CREB3O43889 395 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 ITIH2P19823 946 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 PHBP35232 272 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 EFNA5P52803 228 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 SPIRE2Q8WWL2 714 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 NCANO14594 1321 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 TMEM120BA0PK00 339 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 ANP32DO95626 131 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 SURF1Q15526 300 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 FYB2Q5VWT5 728 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 CENPUQ71F23 418 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 PRUNE1Q86TP1 453 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 ASAP3Q8TDY4 903 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 FERMT1Q9BQL6 677 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 DDX3YO15523 660 aaKnown RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 AGTP01019 485 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 FNTAP49354 379 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 MMP19Q99542 508 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 LBHD1Q9BQE6 289 aaPredicted RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 PCDHA3Q9Y5H8 950 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 DCDC2CA8MYV0 355 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 F5H423 210 aaPredicted RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 KIAA0391O15091 583 aaKnown RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 DHX15O43143 795 aaKnown RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 PRPSAP2O60256 369 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 OSBPP22059 807 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 ADSSP30520 456 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 NAMPTP43490 491 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
CALD1-203ENST00000393118 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 LONP2Q86WA8 852 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 PWWP2AQ96N64 755 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 TXNDC16Q9P2K2 825 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 ZNF536O15090 1300 aa11.12□□□□□ -0.63
CALD1-203ENST00000393118 IRF6O14896 467 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 PLA2G6O60733 806 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 RGS7P49802 495 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 SLC8A3P57103 927 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 TMEM62Q0P6H9 643 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 SMAD1Q15797 465 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 ATP13A4Q4VNC1 1196 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.11□□□□□ -0.63
CALD1-203ENST00000393118 MIPOL1Q8TD10 442 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 PITPNM3Q9BZ71 974 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 GOLGA8RI6L899 631 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 SKOR1P84550 965 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 GCNT1Q02742 428 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms