RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ASAP2O43150 1006 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 TOM1L1O75674 476 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 MYCP01106 439 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 DRG2P55039 364 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 GJA9P57773 515 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 DHX34Q14147 1143 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 ARHGAP44Q17R89 818 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 KIZQ2M2Z5 673 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 SEMA4DQ92854 862 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 KCNN1Q92952 543 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 CENPTQ96BT3 561 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 FMO2Q99518 471 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 CELF4Q9BZC1 486 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 FZD8Q9H461 694 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 XPNPEP3Q9NQH7 507 aa21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 RBAKQ9NYW8 714 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 CNOT8Q9UFF9 292 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-203ENST00000392334 TNNI1P19237 187 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 SCP2P22307 547 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 FGFR4P22455 802 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 PSEN2P49810 448 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 PRMT2P55345 433 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 CETN1Q12798 172 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ZPBP2Q6X784 338 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ZNF516Q92618 1163 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 FAM212AQ96EL1 285 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 FNBP1Q96RU3 617 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 APEX2Q9UBZ4 518 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 NOVA2Q9UNW9 492 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 GOLGA6L10A0A0M3HER8 536 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ANKRD62A6NC57 917 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 H0YHG0 523 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ACKR2O00590 384 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ADAMTS4O75173 837 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 NUDT17P0C025 328 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 PHKA2P46019 1235 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 IFT88Q13099 833 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ATF7IP2Q5U623 682 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 EEF1DP3Q658K8 133 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 KRT39Q6A163 491 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 SV2AQ7L0J3 742 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ARHGEF19Q8IW93 802 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 THNSL1Q8IYQ7 743 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 TAS1R2Q8TE23 839 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 CPB2Q96IY4 423 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ERP44Q9BS26 406 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 ZDHHC18Q9NUE0 388 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 DDX20Q9UHI6 824 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 PTPN22Q9Y2R2 807 aa21.19■□□□□ 0.98
CSNK1D-203ENST00000392334 PTPRJQ12913 1337 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 MKI67P46013 3256 aaKnown RBP21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 PURAQ00577 322 aaKnown RBP21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 KRT71Q3SY84 523 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 EPC2Q52LR7 807 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 TMC2Q8TDI7 906 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 VTI1AQ96AJ9 217 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 DPH5Q9H2P9 285 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 UBE2TQ9NPD8 197 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 NRCAMQ92823 1304 aa21.18■□□□□ 0.98
CSNK1D-203ENST00000392334 TREHO43280 583 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 CDR1P51861 262 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 MAGOHP61326 146 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 DR1Q01658 176 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 ODF2Q5BJF6 829 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 RNF187Q5TA31 235 aaPredicted RBP21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 CXCL17Q6UXB2 119 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 HOOK3Q86VS8 718 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 RHOT2Q8IXI1 618 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 CEP120Q8N960 986 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 RAPGEF5Q92565 580 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 P3H4Q92791 437 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 KAT5Q92993 513 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 MAGOHBQ96A72 148 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 TRIM51Q9BSJ1 452 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 PI4K2AQ9BTU6 479 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 KIAA1586Q9HCI6 787 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 TMEM8AQ9HCN3 771 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 BCCIPQ9P287 314 aaKnown RBP eCLIP21.17■□□□□ 0.988e-7■■□□□ 14.4
CSNK1D-203ENST00000392334 NR2E1Q9Y466 385 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 FAM170AA1A519 330 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 RRN3P2A6NIE6 340 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 LDHAP00338 332 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 TNFAIP3P21580 790 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 GPC3P51654 580 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 ZNF568Q3ZCX4 644 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 C11orf63Q6NUN7 778 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 CCDC121Q6ZUS5 278 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 TATDN2Q93075 761 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 CDHR5Q9HBB8 845 aa21.17■□□□□ 0.98
CSNK1D-203ENST00000392334 SIP14410 1827 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 ABLIM1O14639 778 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 CYP2C9P11712 490 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 PSMD6Q15008 389 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 TSHZ1Q6ZSZ6 1077 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 USP37Q86T82 979 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 ARHGEF26Q96DR7 871 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 SPC25Q9HBM1 224 aa21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 HMX1Q9NP08 348 aaPredicted RBP21.16■□□□□ 0.98
CSNK1D-203ENST00000392334 TRIP12Q14669 1992 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms