RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 RNF216Q9NWF9 866 aaPredicted RBP23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 PCDHB7Q9Y5E2 793 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 SNX9Q9Y5X1 595 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 CHRNB2P17787 502 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 TNFAIP3P21580 790 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 ITGB8P26012 769 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 CDH8P55286 799 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 CYP27A1Q02318 531 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 INCA1Q0VD86 236 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 TUSC3Q13454 348 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 NOMO2Q5JPE7 1267 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 ZNF677Q86XU0 584 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 CRIPAKQ8N1N5 446 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 PCDH10Q9P2E7 1040 aa23.62■■□□□ 1.37
PIKFYVE-203ENST00000392202 KPNA7A9QM74 516 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 PODXLO00592 558 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 SPTLC1O15269 473 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 FGFR1P11362 822 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 RAG1P15918 1043 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 CDR2Q01850 454 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 MFSD5Q6N075 450 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 ZNF662Q6ZS27 426 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 RPUSD2Q8IZ73 545 aaKnown RBP23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 UROC1Q96N76 676 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 NAGPAQ9UK23 515 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 PCDHA13Q9Y5I0 950 aa23.61■■□□□ 1.37
PIKFYVE-203ENST00000392202 CILPO75339 1184 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 VAV2P52735 878 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 LILRA4P59901 499 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 C10orf76Q5T2E6 689 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 LIMS2Q7Z4I7 341 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 GLYCTKQ8IVS8 523 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 DDX27Q96GQ7 796 aaKnown RBP23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 MMS19Q96T76 1030 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 KANSL3Q9P2N6 904 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 ATP8B3O60423 1300 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 GNA15P30679 374 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 MAGEA1P43355 309 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 CLCNKBP51801 687 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 FMO1Q01740 532 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 IKBKEQ14164 716 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 UPP1Q16831 310 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 NPAS4Q8IUM7 802 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 LRFN2Q9ULH4 789 aa23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 BARX2Q9UMQ3 279 aaPredicted RBP23.6■■□□□ 1.37
PIKFYVE-203ENST00000392202 CASTOR2A6NHX0 329 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 HOXA2O43364 376 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 KIAA1328Q86T90 577 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 TMEM199Q8N511 208 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 WHAMMQ8TF30 809 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 RSPH1Q8WYR4 309 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 LUC7LQ9NQ29 371 aaKnown RBP23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 CACNG4Q9UBN1 327 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 FNDC1Q4ZHG4 1894 aaPredicted RBP23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 A0A0U1RQJ8 604 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 MMEP08473 750 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 DSC1Q08554 894 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 COL13A1Q5TAT6 717 aaPredicted RBP23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 TAF3Q5VWG9 929 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 ALKBH5Q6P6C2 394 aaKnown RBP23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 ATRIPQ8WXE1 791 aa23.59■■□□□ 1.37
PIKFYVE-203ENST00000392202 TACC1O75410 805 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 CALCAP01258 141 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 PFKMP08237 780 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 PAEPP09466 180 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 PAX3P23760 479 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 ARHGAP25P42331 645 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 RAD23BP54727 409 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 SOWAHAQ2M3V2 549 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 CCDC122Q5T0U0 273 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 DPH6Q7L8W6 267 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 TXLNBQ8N3L3 684 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 TBC1D13Q9NVG8 400 aa23.58■■□□□ 1.37
PIKFYVE-203ENST00000392202 ABHD14A-ACY1A0A1B0GW23 586 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 FAM163BP0C2L3 166 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 CSF2RAP15509 400 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 AARSP49588 968 aaKnown RBP eCLIP23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 ABI1Q8IZP0 508 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 TOP6BLQ8N6T0 577 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 CASD1Q96PB1 797 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 PCDHB18PQ96TA0 734 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 MRPL45Q9BRJ2 306 aaKnown RBP23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 PAAF1Q9BRP4 392 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 PJA2O43164 708 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 ZNF394Q53GI3 561 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 PALB2Q86YC2 1186 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 C3orf58Q8NDZ4 430 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 TWNKQ96RR1 684 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 ELOVL4Q9GZR5 314 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 SEPT11Q9NVA2 429 aaKnown RBP23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 HMGXB4Q9UGU5 601 aa23.57■■□□□ 1.36
PIKFYVE-203ENST00000392202 RCCD1A6NED2 376 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 NDST1P52848 882 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 NYAP1Q6ZVC0 841 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 SLC4A11Q8NBS3 891 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 TMEM176AQ96HP8 235 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 L1RE1Q9UN81 338 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 TSC2P49815 1807 aa23.56■■□□□ 1.36
PIKFYVE-203ENST00000392202 THAP12O43422 761 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms