RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 GDF2Q9UK05 429 aaPredicted RBP8.09□□□□□ -1.11
TRBV28-201ENST00000390400 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
TRBV28-201ENST00000390400 DOCK5Q9H7D0 1870 aa8.09□□□□□ -1.12
TRBV28-201ENST00000390400 IPO5O00410 1097 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 DLL1O00548 723 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 FANCGO15287 622 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 GAS7O60861 476 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 SYF2O95926 243 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 FAM153BP0C7A2 387 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 ZNF865P0CJ78 1059 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TXNP10599 105 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TGFB3P10600 412 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 KCNA2P16389 499 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 UBA1P22314 1058 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 MARCKSP29966 332 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TXKP42681 527 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 ARL4DP49703 201 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 NDUFA8P51970 172 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 VSNL1P62760 191 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 ITGB3BPQ13352 177 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 MTERF2Q49AM1 385 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 CDCP2Q5VXM1 449 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 RESP18Q5W5W9 173 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 PAPD7Q5XG87 772 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 IQSEC1Q6DN90 963 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TAPT1Q6NXT6 567 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 CYP26C1Q6V0L0 522 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TRAPPC11Q7Z392 1133 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TAB3Q8N5C8 712 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 GIMAP8Q8ND71 665 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 HAS1Q92839 578 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 SLC5A5Q92911 643 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 CAVIN3Q969G5 261 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 GJA10Q969M2 543 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 ELMO3Q96BJ8 720 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 MTMR9Q96QG7 549 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 RIT2Q99578 217 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 SENP7Q9BQF6 1050 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TEKT3Q9BXF9 490 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 RAB34Q9BZG1 259 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TSGA10Q9BZW7 698 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TRIM6Q9C030 488 aaPredicted RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 FBRSQ9HAH7 460 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 PDGFCQ9NRA1 345 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TBC1D22BQ9NU19 505 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 KLHL3Q9UH77 587 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 MYO6Q9UM54 1294 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 PTPN22Q9Y2R2 807 aa8.08□□□□□ -1.12
TRBV28-201ENST00000390400 KIAA0100Q14667 2235 aaKnown RBP8.08□□□□□ -1.12
TRBV28-201ENST00000390400 NFASCO94856 1347 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 GOLGA6BA6NDN3 693 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 H0YHG0 523 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 ABLIM1O14639 778 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 MFAP3LO75121 409 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 WISP1O95388 367 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 GGPS1O95749 300 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 GH1P01241 217 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 GHRP10912 638 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 CYBAP13498 195 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 AKR1A1P14550 325 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 PFKFB1P16118 471 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 PBX1P40424 430 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 ADCYAP1R1P41586 468 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 FNTAP49354 379 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 EPHB4P54760 987 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 KRT83P78385 493 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 CACNB2Q08289 660 aaPredicted RBP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 NR1I3Q14994 352 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 PKN2Q16513 984 aaKnown RBP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 LY6KQ17RY6 165 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 PRAMEF19Q5SWL8 479 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 FAM117BQ6P1L5 589 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 CCDC62Q6P9F0 684 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 METTL7BQ6UX53 244 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 MMGT1Q8N4V1 131 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 MREGQ8N565 214 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 TRPV1Q8NER1 839 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 CFAP61Q8NHU2 1237 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 SPATA20Q8TB22 786 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 BCAS4Q8TDM0 211 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 SH3GL3Q99963 347 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 FBXO2Q9UK22 296 aaPredicted RBP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 PCDHA12Q9UN75 941 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 SRPRBQ9Y5M8 271 aaKnown RBP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 COL4A3BPQ9Y5P4 624 aa8.07□□□□□ -1.12
TRBV28-201ENST00000390400 MYH9P35579 1960 aaKnown RBP8.07□□□□□ -1.12
TRBV28-201ENST00000390400 WDR81Q562E7 1941 aa8.06□□□□□ -1.12
TRBV28-201ENST00000390400 LRRC10BA6NIK2 292 aa8.06□□□□□ -1.12
TRBV28-201ENST00000390400 DDX39AO00148 427 aaKnown RBP8.06□□□□□ -1.12
TRBV28-201ENST00000390400 TMPRSS2O15393 492 aa8.06□□□□□ -1.12
TRBV28-201ENST00000390400 DHX15O43143 795 aaKnown RBP8.06□□□□□ -1.12
TRBV28-201ENST00000390400 SEPT4O43236 478 aa8.06□□□□□ -1.12
TRBV28-201ENST00000390400 ATP9AO75110 1047 aa8.06□□□□□ -1.12
TRBV28-201ENST00000390400 PSMD10O75832 226 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms