RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DNAJC18Q9H819 358 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 PFDN4Q9NQP4 134 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 OLFML3Q9NRN5 406 aa14.98□□□□□ -0.01
RTF1-201ENST00000389629 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 E2F8A0AVK6 867 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 CENPCQ03188 943 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 RASA2Q15283 850 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 CHI3L2Q15782 390 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 PLA2G4FQ68DD2 849 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ALKBH8Q96BT7 664 aaKnown RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 ATXN7L3BQ96GX2 97 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 RMDN3Q96TC7 470 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 KLC2Q9H0B6 622 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 PICK1Q9NRD5 415 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 USP21Q9UK80 565 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 UBE4BO95155 1302 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 AFF2P51816 1311 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 FAM86B1E9PN63 330 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 FAM86B2P0C5J1 330 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 GZMAP12544 262 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ETS2P15036 469 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 TCN1P20061 433 aaPredicted RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 RRM1P23921 792 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 EEF1DP29692 281 aaKnown RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 SPDYCQ5MJ68 293 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 WLSQ5T9L3 541 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 IYDQ6PHW0 289 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 FITM2Q8N6M3 262 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 SPIRE2Q8WWL2 714 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 CNBD2Q96M20 576 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 SLC12A6Q9UHW9 1150 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 XPO7Q9UIA9 1087 aaKnown RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 P4HA2O15460 535 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ATP6V1C1P21283 382 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ACOT2P49753 483 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ZNF200P98182 395 aaPredicted RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 RIPK1Q13546 671 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 SLC44A4Q53GD3 710 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 SLC10A5Q5PT55 438 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 PCNX4Q63HM2 1172 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 JADE1Q6IE81 842 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 BTBD10Q9BSF8 475 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 IKZF4Q9H2S9 585 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 RAVER2Q9HCJ3 691 aaKnown RBP14.97□□□□□ -0.01
RTF1-201ENST00000389629 CHST7Q9NS84 486 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 TBC1D22BQ9NU19 505 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 GABBR1Q9UBS5 961 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 NR2E1Q9Y466 385 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 BCL9O00512 1426 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 AIM2O14862 343 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 NFIAQ12857 509 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 THAP11Q96EK4 314 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 TLK1Q9UKI8 766 aa14.97□□□□□ -0.01
RTF1-201ENST00000389629 FAM200BP0CF97 657 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 P4HA1P13674 534 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 PSMC5P62195 406 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 C1orf228Q6PIY5 440 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 RSPH3Q86UC2 560 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 GPRC5CQ9NQ84 441 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 PCDHB2Q9Y5E7 798 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 NEMP1O14524 444 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 BGNP21810 368 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 SREBF1P36956 1147 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 JAK3P52333 1124 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 PRR5LQ6MZQ0 368 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 KAT5Q92993 513 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 E2F7Q96AV8 911 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 MPP4Q96JB8 637 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 CCDC138Q96M89 665 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 MCEEQ96PE7 176 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 HAUS8Q9BT25 410 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 UNC45AQ9H3U1 944 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 TMEM8AQ9HCN3 771 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 AGAP1Q9UPQ3 857 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 PIAS1O75925 651 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 WEE2P0C1S8 567 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 MOXD1Q6UVY6 613 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 TRIM72Q6ZMU5 477 aa14.96□□□□□ -0.01
RTF1-201ENST00000389629 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.01
RTF1-201ENST00000389629 COL5A2P05997 1499 aaPredicted RBP14.96□□□□□ -0.02
RTF1-201ENST00000389629 EML1O00423 815 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 EIF3EP60228 445 aaKnown RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 ZBTB17Q13105 803 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 BLMHQ13867 455 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 SMTNL2Q2TAL5 461 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 LRRC57Q8N9N7 239 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 RMDN2Q96LZ7 410 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 ZNF184Q99676 751 aaPredicted RBP14.95□□□□□ -0.02
RTF1-201ENST00000389629 ZNF341Q9BYN7 854 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 FOXP3Q9BZS1 431 aa14.95□□□□□ -0.02
RTF1-201ENST00000389629 ASTN1O14525 1302 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms