RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DTNAQ9Y4J8 743 aa6.01□□□□□ -1.45
RFC1-202ENST00000381897 DIP2BQ9P265 1576 aa6.01□□□□□ -1.45
RFC1-202ENST00000381897 TMEM120BA0PK00 339 aa6□□□□□ -1.45
RFC1-202ENST00000381897 SNAP23O00161 211 aa6□□□□□ -1.45
RFC1-202ENST00000381897 TSPAN6O43657 245 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CACNA2D1P54289 1103 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ZMYND11Q15326 602 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ATG14Q6ZNE5 492 aa6□□□□□ -1.45
RFC1-202ENST00000381897 APTXQ7Z2E3 356 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 P3H2Q8IVL5 708 aa6□□□□□ -1.45
RFC1-202ENST00000381897 SYTL1Q8IYJ3 562 aa6□□□□□ -1.45
RFC1-202ENST00000381897 AHI1Q8N157 1196 aa6□□□□□ -1.45
RFC1-202ENST00000381897 RFFLQ8WZ73 363 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ERP27Q96DN0 273 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CRELD1Q96HD1 420 aa6□□□□□ -1.45
RFC1-202ENST00000381897 L3MBTL3Q96JM7 780 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 EXOC2Q96KP1 924 aa6□□□□□ -1.45
RFC1-202ENST00000381897 MKRN2Q9H000 416 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 ADAM19Q9H013 955 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CDHR5Q9HBB8 845 aa6□□□□□ -1.45
RFC1-202ENST00000381897 THG1LQ9NWX6 298 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 PACSIN2Q9UNF0 486 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 DDX3XO00571 662 aaKnown RBP eCLIP6□□□□□ -1.45
RFC1-202ENST00000381897 RTN2O75298 545 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NCF2P19878 526 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 MRC1P22897 1456 aa6□□□□□ -1.45
RFC1-202ENST00000381897 BDNFP23560 247 aa6□□□□□ -1.45
RFC1-202ENST00000381897 GSTO1P78417 241 aa6□□□□□ -1.45
RFC1-202ENST00000381897 TMED2Q15363 201 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CMPK2Q5EBM0 449 aa6□□□□□ -1.45
RFC1-202ENST00000381897 OLFML1Q6UWY5 402 aa6□□□□□ -1.45
RFC1-202ENST00000381897 GADL1Q6ZQY3 521 aa6□□□□□ -1.45
RFC1-202ENST00000381897 OTUD6AQ7L8S5 288 aa6□□□□□ -1.45
RFC1-202ENST00000381897 DDX53Q86TM3 631 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 ERICH1Q86X53 443 aa6□□□□□ -1.45
RFC1-202ENST00000381897 MAP7D3Q8IWC1 876 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CNBD1Q8NA66 436 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CATSPER2Q96P56 530 aa6□□□□□ -1.45
RFC1-202ENST00000381897 TRIM9Q9C026 710 aa6□□□□□ -1.45
RFC1-202ENST00000381897 KIF17Q9P2E2 1029 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NFAT5O94916 1531 aa6□□□□□ -1.45
RFC1-202ENST00000381897 PNPLA7Q6ZV29 1317 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CDH16O75309 829 aa6□□□□□ -1.45
RFC1-202ENST00000381897 KRT19P08727 400 aa6□□□□□ -1.45
RFC1-202ENST00000381897 IMPDH2P12268 514 aa6□□□□□ -1.45
RFC1-202ENST00000381897 MYL4P12829 197 aa6□□□□□ -1.45
RFC1-202ENST00000381897 KLRC1P26715 233 aa6□□□□□ -1.45
RFC1-202ENST00000381897 MMP13P45452 471 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ITGA8P53708 1063 aa6□□□□□ -1.45
RFC1-202ENST00000381897 RPP30P78346 268 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 COASYQ13057 564 aa6□□□□□ -1.45
RFC1-202ENST00000381897 UAP1Q16222 522 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 SLC44A4Q53GD3 710 aa6□□□□□ -1.45
RFC1-202ENST00000381897 TRAPPC3LQ5T215 181 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CDCA2Q69YH5 1023 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 KLC3Q6P597 504 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CENPUQ71F23 418 aa6□□□□□ -1.45
RFC1-202ENST00000381897 JAMLQ86YT9 394 aa6□□□□□ -1.45
RFC1-202ENST00000381897 REXO1Q8N1G1 1221 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 IPCEF1Q8WWN9 437 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 CEP19Q96LK0 163 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NR1H4Q96RI1 486 aaPredicted RBP6□□□□□ -1.45
RFC1-202ENST00000381897 FOXP3Q9BZS1 431 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NACA2Q9H009 215 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CCDC68Q9H2F9 335 aa6□□□□□ -1.45
RFC1-202ENST00000381897 MRPL46Q9H2W6 279 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 SACM1LQ9NTJ5 587 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NCDNQ9UBB6 729 aa6□□□□□ -1.45
RFC1-202ENST00000381897 CIDEBQ9UHD4 219 aa6□□□□□ -1.45
RFC1-202ENST00000381897 SLC12A6Q9UHW9 1150 aa6□□□□□ -1.45
RFC1-202ENST00000381897 DENND2AQ9ULE3 1009 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ZNF839A8K0R7 811 aa6□□□□□ -1.45
RFC1-202ENST00000381897 UNC5CO95185 931 aa6□□□□□ -1.45
RFC1-202ENST00000381897 FAM200BP0CF97 657 aa6□□□□□ -1.45
RFC1-202ENST00000381897 VCAM1P19320 739 aa6□□□□□ -1.45
RFC1-202ENST00000381897 PTPN4P29074 926 aa6□□□□□ -1.45
RFC1-202ENST00000381897 GNA15P30679 374 aa6□□□□□ -1.45
RFC1-202ENST00000381897 KLK7P49862 253 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ARHGAP4P98171 946 aa6□□□□□ -1.45
RFC1-202ENST00000381897 FOXO4P98177 505 aa6□□□□□ -1.45
RFC1-202ENST00000381897 DSG1Q02413 1049 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ORC1Q13415 861 aa6□□□□□ -1.45
RFC1-202ENST00000381897 LGSNQ5TDP6 509 aa6□□□□□ -1.45
RFC1-202ENST00000381897 KLHL17Q6TDP4 642 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ISLR2Q6UXK2 745 aa6□□□□□ -1.45
RFC1-202ENST00000381897 ATCAYQ86WG3 371 aa6□□□□□ -1.45
RFC1-202ENST00000381897 PEX5LQ8IYB4 626 aa6□□□□□ -1.45
RFC1-202ENST00000381897 GTPBP3Q969Y2 492 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 DYDC2Q96IM9 177 aa6□□□□□ -1.45
RFC1-202ENST00000381897 NOL6Q9H6R4 1146 aaKnown RBP6□□□□□ -1.45
RFC1-202ENST00000381897 ZNF408Q9H9D4 720 aa6□□□□□ -1.45
RFC1-202ENST00000381897 SPEF2Q9C093 1822 aa6□□□□□ -1.45
RFC1-202ENST00000381897 RASA4BC9J798 803 aa5.99□□□□□ -1.45
RFC1-202ENST00000381897 PMM2O15305 246 aa5.99□□□□□ -1.45
RFC1-202ENST00000381897 PRPF4O43172 522 aaKnown RBP eCLIP5.99□□□□□ -1.455e-7■■■■□ 24.4
RFC1-202ENST00000381897 PLEKP08567 350 aaPredicted RBP5.99□□□□□ -1.45
RFC1-202ENST00000381897 RARGP13631 454 aa5.99□□□□□ -1.45
RFC1-202ENST00000381897 ABCB4P21439 1286 aa5.99□□□□□ -1.45
RFC1-202ENST00000381897 ADCY7P51828 1080 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms