RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 NDE1Q9NXR1 346 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ASB14A6NK59 587 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 EPHB6O15197 1021 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 NVLO15381 856 aaKnown RBP18.01■□□□□ 0.47
SGCB-201ENST00000381431 FOXP2O15409 715 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 PRAMEP78395 509 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 THEM5Q8N1Q8 247 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ALKBH8Q96BT7 664 aaKnown RBP18.01■□□□□ 0.47
SGCB-201ENST00000381431 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 AIPL1Q9NZN9 384 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 TMX2Q9Y320 296 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 EML1O00423 815 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 CCDC22O60826 627 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 CHEK2O96017 543 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 GNAT1P11488 350 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 DPEP1P16444 411 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ZFXP17010 805 aaPredicted RBP18.01■□□□□ 0.47
SGCB-201ENST00000381431 TSPY1Q01534 308 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ST13P4Q8IZP2 240 aaPredicted RBP18.01■□□□□ 0.47
SGCB-201ENST00000381431 SLC40A1Q9NP59 571 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 PFDN1O60925 122 aa18■□□□□ 0.47
SGCB-201ENST00000381431 SH3BGRP55822 239 aaPredicted RBP18■□□□□ 0.47
SGCB-201ENST00000381431 OVGP1Q12889 678 aa18■□□□□ 0.47
SGCB-201ENST00000381431 RASSF3Q86WH2 238 aa18■□□□□ 0.47
SGCB-201ENST00000381431 CREG2Q8IUH2 290 aa18■□□□□ 0.47
SGCB-201ENST00000381431 USP33Q8TEY7 942 aa18■□□□□ 0.47
SGCB-201ENST00000381431 SCG3Q8WXD2 468 aaKnown RBP18■□□□□ 0.47
SGCB-201ENST00000381431 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
SGCB-201ENST00000381431 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
SGCB-201ENST00000381431 WDR70Q9NW82 654 aa18■□□□□ 0.47
SGCB-201ENST00000381431 BCL9O00512 1426 aa18■□□□□ 0.47
SGCB-201ENST00000381431 IL1R1P14778 569 aa18■□□□□ 0.47
SGCB-201ENST00000381431 CPA2P48052 419 aa18■□□□□ 0.47
SGCB-201ENST00000381431 COL23A1Q86Y22 540 aaPredicted RBP18■□□□□ 0.47
SGCB-201ENST00000381431 MTMR12Q9C0I1 747 aa18■□□□□ 0.47
SGCB-201ENST00000381431 EHD4Q9H223 541 aa18■□□□□ 0.47
SGCB-201ENST00000381431 SUN2Q9UH99 717 aa18■□□□□ 0.47
SGCB-201ENST00000381431 NEMP1O14524 444 aa18■□□□□ 0.47
SGCB-201ENST00000381431 HNRNPH1P31943 449 aaKnown RBP18■□□□□ 0.47
SGCB-201ENST00000381431 NLRP11P59045 1033 aaKnown RBP18■□□□□ 0.47
SGCB-201ENST00000381431 OLFML3Q9NRN5 406 aa18■□□□□ 0.47
SGCB-201ENST00000381431 TSR3Q9UJK0 312 aaKnown RBP18■□□□□ 0.47
SGCB-201ENST00000381431 DDX3XO00571 662 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCB-201ENST00000381431 ERVK-9P63128 1117 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 STX3Q13277 289 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 CUL3Q13618 768 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 ZNF560Q96MR9 790 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
SGCB-201ENST00000381431 MEA1Q16626 185 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 TATDN2Q93075 761 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
SGCB-201ENST00000381431 TMBIM4Q9HC24 238 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 DFFAO00273 331 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 IGF2BP3O00425 579 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCB-201ENST00000381431 GSTA4O15217 222 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 ITGB3P05106 788 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 GZMAP12544 262 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 RARGP13631 454 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 KRT4P19013 534 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 TPI1P60174 286 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 LONP2Q86WA8 852 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 CCDC33Q8N5R6 958 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 TTC8Q8TAM2 541 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCB-201ENST00000381431 LOC100653049A0A140TA62 436 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 KRT34O76011 436 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 SLITRK3O94933 977 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 TCF7P36402 384 aaPredicted RBP17.99■□□□□ 0.47
SGCB-201ENST00000381431 AP2B1P63010 937 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 MROH9Q5TGP6 573 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 ITPRIPL1Q6GPH6 555 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 ZNF677Q86XU0 584 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 KCNQ5Q9NR82 932 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 TRAF3IP3Q9Y228 551 aa17.99■□□□□ 0.47
SGCB-201ENST00000381431 CTSHP09668 335 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 HSPA8P11142 646 aaKnown RBP17.98■□□□□ 0.47
SGCB-201ENST00000381431 IER5Q5VY09 327 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 SPIRE2Q8WWL2 714 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 HPDLQ96IR7 371 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 FAM96AQ9H5X1 160 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 RCCD1A6NED2 376 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 PPP1R12AO14974 1030 aaPredicted RBP17.98■□□□□ 0.47
SGCB-201ENST00000381431 RARRES1P49788 294 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 SNRPFP62306 86 aaKnown RBP17.98■□□□□ 0.47
SGCB-201ENST00000381431 IL17AQ16552 155 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 SLC5A5Q92911 643 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 FOXP3Q9BZS1 431 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 C17orf75Q9HAS0 396 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 SLC4A7Q9Y6M7 1214 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 MST1RQ04912 1400 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 KLRC4O43908 158 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 CSDE1O75534 798 aaKnown RBP17.98■□□□□ 0.47
SGCB-201ENST00000381431 RFC5P40937 340 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 SULT1E1P49888 294 aa17.98■□□□□ 0.47
SGCB-201ENST00000381431 CASP5P51878 434 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms