RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PLVAPQ9BX97 442 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 VPS33BQ9H267 617 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 DMAC2Q9NW81 257 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ZNRF3Q9ULT6 936 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 A0A1W2PPM1 405 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 SMAPO00193 183 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 GAS7O60861 476 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 BANF1O75531 89 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ATP5HO75947 161 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ZSCAN5DPP0CG00 497 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ATF7P17544 494 aaPredicted RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 MAPK4P31152 587 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 NOP14P78316 857 aaKnown RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 DEUP1Q05D60 604 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 SLC47A2Q86VL8 602 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 OLIG1Q8TAK6 271 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 CLEC4DQ8WXI8 215 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 ZNF577Q9BSK1 485 aa14.65□□□□□ -0.06
SDC1-202ENST00000381150 R3HDM2Q9Y2K5 976 aaKnown RBP14.65□□□□□ -0.06
SDC1-202ENST00000381150 MYH11P35749 1972 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 BHMG1C9JSJ3 638 aaPredicted RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 PI4K2BG5E9Z4 385 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 TROVE2P10155 538 aaKnown RBP eCLIP14.64□□□□□ -0.07
SDC1-202ENST00000381150 GHRHRQ02643 423 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 CXCL9Q07325 125 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 SLC1A5Q15758 541 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 GRAMD1AQ96CP6 724 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 MXRA8Q9BRK3 442 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 UBE2OQ9C0C9 1292 aaKnown RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 RGS17Q9UGC6 210 aaPredicted RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 ZNF148Q9UQR1 794 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 GTPBP10A4D1E9 387 aaKnown RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 IPO5O00410 1097 aaKnown RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 DHX15O43143 795 aaKnown RBP14.64□□□□□ -0.07
SDC1-202ENST00000381150 TBX10O75333 385 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 HAUS5O94927 633 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 CTNNA2P26232 953 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 NEK3P51956 506 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 P3H1Q32P28 736 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 ACSBG2Q5FVE4 666 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 LRRC74BQ6ZQY2 392 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 CYFIP1Q7L576 1253 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 ZBED8Q8IZ13 594 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 DAW1Q8N136 415 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 WDR11Q9BZH6 1224 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 PARVGQ9HBI0 331 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 LRCH1Q9Y2L9 728 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 LOXHD1Q8IVV2 1947 aa14.64□□□□□ -0.07
SDC1-202ENST00000381150 ICAM1P05362 532 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 T-ENOLP0DO92 83 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 KITP10721 976 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 KRT4P19013 534 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 CD58P19256 250 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 MAGEA4P43358 317 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 GCLCP48506 637 aaPredicted RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 KDSRQ06136 332 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 FASTKD3Q14CZ7 662 aaKnown RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 MAML1Q92585 1016 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 PCDHB18PQ96TA0 734 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 ITIH2P19823 946 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 PTPN4P29074 926 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 RFWD2Q8NHY2 731 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 WDR60Q8WVS4 1066 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 TTC17Q96AE7 1141 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 PRR11Q96HE9 360 aaPredicted RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 RIT2Q99578 217 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 PICK1Q9NRD5 415 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 KCND2Q9NZV8 630 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 SEL1LQ9UBV2 794 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 SCAF8Q9UPN6 1271 aaKnown RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 NPTXRO95502 500 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 ASNSP08243 561 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 ACADSP16219 412 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 ADRA1DP25100 572 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 OTOAQ7RTW8 1153 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 IL31RAQ8NI17 732 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 ZNF333Q96JL9 665 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 CADM1Q9BY67 442 aaKnown RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 WNT8AQ9H1J5 351 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 ARL8BQ9NVJ2 186 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
SDC1-202ENST00000381150 NCANO14594 1321 aa14.63□□□□□ -0.07
SDC1-202ENST00000381150 NFIBO00712 420 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 PFDN1O60925 122 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 USP1O94782 785 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 RALAP11233 206 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 ETS1P14921 441 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 SERPINB3P29508 390 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 MCL1Q07820 350 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 CLUL1Q15846 466 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 PARP6Q2NL67 630 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 IRGCQ6NXR0 463 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 C4orf50Q6ZRC1 276 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 NRG4Q8WWG1 115 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms