RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TMEM8BA6NDV4 472 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 MEFVO15553 781 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-203ENST00000380748 KCNE1P15382 129 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 RPL9P32969 192 aaKnown RBP18.96■□□□□ 0.63
HMGN1-203ENST00000380748 KRT2P35908 639 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 ZNF568Q3ZCX4 644 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 FSTL4Q6MZW2 842 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 HHIPQ96QV1 700 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 NACC1Q96RE7 527 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 PCDHB8Q9UN66 801 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
HMGN1-203ENST00000380748 CITO14578 2027 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 DCLK1O15075 740 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 CDKL5O76039 1030 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 EPHB3P54753 998 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 CREB5Q02930 508 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 RING1Q06587 406 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 DUSP4Q13115 394 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 PLD1Q13393 1074 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 GPR158Q5T848 1215 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 BPIFB1Q8TDL5 484 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 IFT74Q96LB3 600 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
HMGN1-203ENST00000380748 SCNM1Q9BWG6 230 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 ATXN3LQ9H3M9 355 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 PTPRHQ9HD43 1115 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 OBP2AQ9NY56 170 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 CNTN3Q9P232 1028 aa18.95■□□□□ 0.62
HMGN1-203ENST00000380748 TIMM13Q9Y5L4 95 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-203ENST00000380748 LNP1A1A4G5 178 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 K7ERI5 159 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 SOAT2O75908 522 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 TMEM196Q5HYL7 178 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 TTC9BQ8N6N2 239 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 ZCCHC14Q8WYQ9 949 aaKnown RBP18.94■□□□□ 0.62
HMGN1-203ENST00000380748 CHFRQ96EP1 664 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 SMG9Q9H0W8 520 aaKnown RBP18.94■□□□□ 0.62
HMGN1-203ENST00000380748 DAXXQ9UER7 740 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-203ENST00000380748 TUBGCP4Q9UGJ1 667 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 LHX6Q9UPM6 363 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 SLC27A5Q9Y2P5 690 aa18.94■□□□□ 0.62
HMGN1-203ENST00000380748 BCLAF3A2AJT9 711 aaKnown RBP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 ATG13O75143 517 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 RNF40O75150 1001 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 CAVIN2O95810 425 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 GABRR2P28476 465 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 MARCKSP29966 332 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 ALDH1A3P47895 512 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 CYP4F8P98187 520 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 YWHAHQ04917 246 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 GRSF1Q12849 480 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 ELF2Q15723 593 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 DAB2IPQ5VWQ8 1189 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 DNAJB7Q7Z6W7 309 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 ACAP3Q96P50 834 aa18.93■□□□□ 0.62
HMGN1-203ENST00000380748 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-203ENST00000380748 FREM2Q5SZK8 3169 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 SOBPA7XYQ1 873 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 ABLIM1O14639 778 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 OAZ2O95190 189 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 CTDNEP1O95476 244 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 EGFP01133 1207 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
HMGN1-203ENST00000380748 MCM2P49736 904 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 CAMKK1Q8N5S9 505 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
HMGN1-203ENST00000380748 HPS4Q9NQG7 708 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 GKN1Q9NS71 199 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-203ENST00000380748 PHLPP2Q6ZVD8 1323 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 SETXQ7Z333 2677 aaKnown RBP18.92■□□□□ 0.62
HMGN1-203ENST00000380748 GCN1Q92616 2671 aaKnown RBP18.92■□□□□ 0.62
HMGN1-203ENST00000380748 LAMA5O15230 3695 aa18.92■□□□□ 0.62
HMGN1-203ENST00000380748 OTOL1A6NHN0 477 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-203ENST00000380748 M0QZQ0 153 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 RHOBTB1O94844 696 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 MCF2P10911 925 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 ARHGAP15Q53QZ3 475 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 CENPPQ6IPU0 288 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 KIAA1211LQ6NV74 962 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 TAS1R3Q7RTX0 852 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 ATAD1Q8NBU5 361 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 KIFAP3Q92845 792 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
HMGN1-203ENST00000380748 TASP1Q9H6P5 420 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 FBRSL1Q9HCM7 1045 aaKnown RBP18.91■□□□□ 0.62
HMGN1-203ENST00000380748 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 NUP205Q92621 2012 aa18.91■□□□□ 0.62
HMGN1-203ENST00000380748 MTMR11A4FU01 709 aa18.9■□□□□ 0.62
HMGN1-203ENST00000380748 CCDC169A6NNP5 214 aa18.9■□□□□ 0.62
HMGN1-203ENST00000380748 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
HMGN1-203ENST00000380748 TRDMT1O14717 391 aaKnown RBP18.9■□□□□ 0.62
HMGN1-203ENST00000380748 CEACAM1P13688 526 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms