RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GCNT3O95395 438 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 KRT14P02533 472 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ADRB2P07550 413 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CYP2C9P11712 490 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 NMT1P30419 496 aaKnown RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 DRP2Q13474 957 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 RAPGEF1Q13905 1077 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 GJB7Q6PEY0 223 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 LRIG3Q6UXM1 1119 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 RSPH3Q86UC2 560 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 PBKQ96KB5 322 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 DEFB118Q96PH6 123 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TSPAN18Q96SJ8 248 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 DAAM1Q9Y4D1 1078 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 PMM2O15305 246 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TREHO43280 583 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF16P17020 682 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 MAGEA9P43362 315 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 MRPS6P82932 125 aaKnown RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CBWD6Q4V339 395 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CBWD3Q5JTY5 395 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CBWD5Q5RIA9 395 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 SLFN12LQ6IEE8 588 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 IFT20Q8IY31 132 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 DEPTORQ8TB45 409 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TRAPPC12Q8WVT3 735 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 GOLPH3Q9H4A6 298 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 PLEKHA4Q9H4M7 779 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TMBIM4Q9HC24 238 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 STARD7Q9NQZ5 370 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ARMCX3Q9UH62 379 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TNFSF13BQ9Y275 285 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TRPV2Q9Y5S1 764 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ALPK3Q96L96 1907 aa8.27□□□□□ -1.08
CDKL5-202ENST00000379996 DENND3A2RUS2 1198 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 DARSP14868 501 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 EXOC3L4Q17RC7 722 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 KRT12Q99456 494 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 MCOLN1Q9GZU1 580 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 KIAA1586Q9HCI6 787 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 EPB41L5Q9HCM4 733 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 AGPAT3Q9NRZ7 376 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 COL4A6Q14031 1691 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 TRIP12Q14669 1992 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 FAM189A1O60320 539 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 PAEPP09466 180 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 FLT3P36888 993 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 CLCN3P51790 818 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 MCL1Q07820 350 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 PAK2Q13177 524 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 PTGISQ16647 500 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 MRPL4Q9BYD3 311 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 METTL14Q9HCE5 456 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 CHST12Q9NRB3 414 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 COG5Q9UP83 839 aa8.27□□□□□ -1.09
CDKL5-202ENST00000379996 NOC2LQ9Y3T9 749 aaKnown RBP8.27□□□□□ -1.09
CDKL5-202ENST00000379996 SLC16A4O15374 487 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 FNTAP49354 379 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 GUCY2DQ02846 1103 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 STRN3Q13033 797 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SPDYCQ5MJ68 293 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SLC39A4Q6P5W5 647 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 LRRC71Q8N4P6 559 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RNPC3Q96LT9 517 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ACO2Q99798 780 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SH2D3AQ9BRG2 576 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 CAPS2Q9BXY5 557 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 CELF4Q9BZC1 486 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 GCOM2Q9BZD3 368 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 GCNT4Q9P109 453 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 HTTP42858 3142 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 TMEM253P0C7T8 217 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SOX5P35711 763 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 HSD17B3P37058 310 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 PAFAH1B1P43034 410 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ZNF844Q08AG5 666 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 CUL1Q13616 776 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 MAPK6Q16659 721 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ALKBH5Q6P6C2 394 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 C6orf89Q6UWU4 347 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 PALB2Q86YC2 1186 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RHPN2Q8IUC4 686 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RNF149Q8NC42 400 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 CD101Q93033 1021 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 STK33Q9BYT3 514 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RASSF4Q9H2L5 321 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms