RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF699Q32M78 642 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ODF2Q5BJF6 829 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 FAAH2Q6GMR7 532 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 PRUNE1Q86TP1 453 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 LCA5Q86VQ0 697 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 CCDC105Q8IYK2 499 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 KIAA0319LQ8IZA0 1049 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 OR6J1Q8NGC5 347 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 MAGOHBQ96A72 148 aaKnown RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 SYNCQ9H7C4 482 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 HPCAL4Q9UM19 191 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 RBBP6Q7Z6E9 1792 aaKnown RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 H0YCG3 227 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ERLIN2O94905 339 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 C4BPAP04003 597 aaKnown RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ITGB3P05106 788 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 NFICP08651 508 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 HPDP32754 393 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 PLTPP55058 493 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 PTK7Q13308 1070 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 IER5Q5VY09 327 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 MMGT1Q8N4V1 131 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 TMC2Q8TDI7 906 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ACO2Q99798 780 aaKnown RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
NEDD9-201ENST00000379433 CXCL16Q9H2A7 254 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
NEDD9-201ENST00000379433 ASB14A6NK59 587 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 GPR25O00155 361 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 MYO1FO00160 1098 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 RFC5P40937 340 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 PSMD6Q15008 389 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 RBBP5Q15291 538 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TARBP2Q15633 366 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TBC1D25Q3MII6 688 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 DHRS1Q96LJ7 313 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 CCDC114Q96M63 670 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 OSMRQ99650 979 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TJP2Q9UDY2 1190 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TRIM66O15016 1216 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 ADCY6O43306 1168 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 PRLRP16471 622 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 SMPD1P17405 629 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 ATF7P17544 494 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 RPL7AP62424 266 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 LACTBP83111 547 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 CCDC62Q6P9F0 684 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 B4GALNT4Q76KP1 1039 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 EFCAB13Q8IY85 973 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 UBL4BQ8N7F7 174 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 FAM167AQ96KS9 214 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 ATP8A1Q9Y2Q0 1164 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TLDC2A0PJX2 215 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 MAP2K7O14733 419 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 P4HA2O15460 535 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 GRAP2O75791 330 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 MCM3P25205 808 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 GJA8P48165 433 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 ARHGAP1Q07960 439 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-201ENST00000379433 FAM117BQ6P1L5 589 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 DCUN1D2Q6PH85 259 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 FAM107BQ9H098 131 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 NEUROG2Q9H2A3 272 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 SBF1O95248 1867 aa11.47□□□□□ -0.57
NEDD9-201ENST00000379433 HBP1O60381 514 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 SNAI1O95863 264 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-201ENST00000379433 GH1P01241 217 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 GTF2A2P52657 109 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-201ENST00000379433 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 SLC43A3Q8NBI5 491 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 PBKQ96KB5 322 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 ACBD3Q9H3P7 528 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 CISHQ9NSE2 258 aa11.46□□□□□ -0.57
NEDD9-201ENST00000379433 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 IGKV6D-21A0A0A0MT36 114 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 OGTO15294 1046 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 HSF2BPO75031 334 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 LDHAP00338 332 aaKnown RBP11.46□□□□□ -0.58
NEDD9-201ENST00000379433 STAG3L1P0CL83 205 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 TCF4P15884 667 aa11.46□□□□□ -0.58
NEDD9-201ENST00000379433 TCF3P15923 654 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms