RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 DNTTIP2Q5QJE6 756 aaKnown RBP26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 URGCPQ8TCY9 931 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 SLC20A1Q8WUM9 679 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 MMS19Q96T76 1030 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 SMYD3Q9H7B4 428 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 KANSL3Q9P2N6 904 aa26.23■■□□□ 1.79
ECHDC3-201ENST00000379215 ARHGAP25P42331 645 aa26.22■■□□□ 1.79
ECHDC3-201ENST00000379215 LRRC26Q2I0M4 334 aa26.22■■□□□ 1.79
ECHDC3-201ENST00000379215 DDX1Q92499 740 aaKnown RBP26.22■■□□□ 1.79
ECHDC3-201ENST00000379215 BARX2Q9UMQ3 279 aaPredicted RBP26.22■■□□□ 1.79
ECHDC3-201ENST00000379215 SNX9Q9Y5X1 595 aa26.22■■□□□ 1.79
ECHDC3-201ENST00000379215 KPNA7A9QM74 516 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 HOXA2O43364 376 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 FAM163BP0C2L3 166 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 TNNT1P13805 278 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 CCL23P55773 120 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 OLIG1Q8TAK6 271 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 ENPP3O14638 875 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 CILPO75339 1184 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 H2AFZP0C0S5 128 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 CYP2C18P33260 490 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 ETF1P62495 437 aaKnown RBP26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 FMO1Q01740 532 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 TUSC3Q13454 348 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 TAF3Q5VWG9 929 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 H2AFVQ71UI9 128 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 DPH6Q7L8W6 267 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 SCLYQ96I15 445 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 PDCL3Q9H2J4 239 aa26.21■■□□□ 1.79
ECHDC3-201ENST00000379215 TRIP11Q15643 1979 aa26.2■■□□□ 1.79
ECHDC3-201ENST00000379215 BTNL10A8MVZ5 291 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 PPEF2O14830 753 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 MED7O43513 233 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 MMEP08473 750 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 CHRNB2P17787 502 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 GOLGA2P5Q9HBQ8 144 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 RNF19AQ9NV58 838 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 KIAA1257Q9ULG3 409 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 PCDHB7Q9Y5E2 793 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 BRCA2P51587 3418 aa26.2■■□□□ 1.78
ECHDC3-201ENST00000379215 PODXLO00592 558 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 THAP12O43422 761 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 TACC1O75410 805 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 IBSPP21815 317 aaPredicted RBP26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 RAP1GAPP47736 663 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 LILRA4P59901 499 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 CNKSR3Q6P9H4 555 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 UNC93AQ86WB7 457 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 TMEM130Q8N3G9 435 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 RNF10Q8N5U6 811 aaKnown RBP26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 TOP6BLQ8N6T0 577 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 SDCBP2Q9H190 292 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 MIOSQ9NXC5 875 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 LRFN2Q9ULH4 789 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 GUCA1BQ9UMX6 200 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 INPP5FQ9Y2H2 1132 aa26.19■■□□□ 1.78
ECHDC3-201ENST00000379215 KIAA0355O15063 1070 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 HUS1O60921 280 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 RTN2O75298 545 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 CDH8P55286 799 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 NOMO2Q5JPE7 1267 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 ABI1Q8IZP0 508 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 TMEM176AQ96HP8 235 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 LACRTQ9GZZ8 138 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 ISCUQ9H1K1 167 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 ACP6Q9NPH0 428 aa26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 PUF60Q9UHX1 559 aaKnown RBP26.18■■□□□ 1.78
ECHDC3-201ENST00000379215 POMCP01189 267 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 GNG11P61952 73 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 APPL2Q8NEU8 664 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 CTNNBL1Q8WYA6 563 aaPredicted RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 SECISBP2LQ93073 1101 aaKnown RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 NT5C1AQ9BXI3 368 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 ARHGEF37A1IGU5 675 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 ANKRD62A6NC57 917 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 RCCD1A6NED2 376 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 LSM8O95777 96 aaKnown RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 TIMP1P01033 207 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 TMEM253P0C7T8 217 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 AFF1P51825 1210 aaKnown RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 RAD23BP54727 409 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 IFI16Q16666 785 aaKnown RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 UPP1Q16831 310 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 CLEC16AQ2KHT3 1053 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 ZNF606Q8WXB4 792 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 CALR3Q96L12 384 aaKnown RBP26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 CEP83Q9Y592 693 aa26.17■■□□□ 1.78
ECHDC3-201ENST00000379215 A0A0A6YYK5 440 aaPredicted RBP26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 A0A0U1RQJ8 604 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 CLCNKBP51801 687 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 IKBKEQ14164 716 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 STILQ15468 1287 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 ZNF394Q53GI3 561 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 LIMS2Q7Z4I7 341 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 NPAS4Q8IUM7 802 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 KIF18AQ8NI77 898 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 ATRIPQ8WXE1 791 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 TRIM11Q96F44 468 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 PCDHB18PQ96TA0 734 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms