RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
RAB3IP-204ENST00000378815 CXCL16Q9H2A7 254 aa16.4■□□□□ 0.22
RAB3IP-204ENST00000378815 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
RAB3IP-204ENST00000378815 FAM53CQ9NYF3 392 aa16.4■□□□□ 0.22
RAB3IP-204ENST00000378815 PIN4Q9Y237 131 aaKnown RBP16.4■□□□□ 0.22
RAB3IP-204ENST00000378815 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 MMP8P22894 467 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 PEX5P50542 639 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 YARSP54577 528 aaKnown RBP16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 SP3Q02447 781 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 ZBTB6Q15916 424 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 NBPF20Q3BBV1 942 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 C2CD6Q53TS8 623 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 LIN9Q5TKA1 542 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 MMS22LQ6ZRQ5 1243 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 KRT35Q92764 455 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 CAPNS2Q96L46 248 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 ANAPC7Q9UJX3 599 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 HES2Q9Y543 173 aa16.39■□□□□ 0.21
RAB3IP-204ENST00000378815 ZMYND10O75800 440 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 PAEPP09466 180 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 P4HA1P13674 534 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 RAD23BP54727 409 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 UBXN11Q5T124 520 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 PLEKHA7Q6IQ23 1121 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 RNPC3Q96LT9 517 aaKnown RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CNTN3Q9P232 1028 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CILPO75339 1184 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CTNNA2P26232 953 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CTNNA1P35221 906 aaKnown RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 MARCKSL1P49006 195 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 TNNC1P63316 161 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 DEFB115Q30KQ5 88 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 LLGL2Q6P1M3 1020 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 KRT12Q99456 494 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 FUT8Q9BYC5 575 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 TRIM6Q9C030 488 aaPredicted RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 FAM124BQ9H5Z6 455 aaPredicted RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 RNF186Q9NXI6 227 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 STIM2Q9P246 746 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 L1RE1Q9UN81 338 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
RAB3IP-204ENST00000378815 SPOPO43791 374 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 SASH3O75995 380 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 RECQL4O94761 1208 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CCNI2Q6ZMN8 369 aaPredicted RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 WDTC1Q8N5D0 677 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 TMEM35BQ8NCS4 154 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 TRIM7Q9C029 511 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CCDC66A2RUB6 948 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CCDC188H7C350 402 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 KRIT1O00522 736 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 FGGP02679 453 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 SLC7A5Q01650 507 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 PHLDB2Q86SQ0 1253 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 SLC4A11Q8NBS3 891 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 C1orf131Q8NDD1 294 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 TWNKQ96RR1 684 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CFHR5Q9BXR6 569 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 LHX5Q9H2C1 402 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 XPNPEP3Q9NQH7 507 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 HMGXB4Q9UGU5 601 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 PCDHA3Q9Y5H8 950 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 RALGAPA2Q2PPJ7 1873 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CASP8AP2Q9UKL3 1982 aa16.37■□□□□ 0.21
RAB3IP-204ENST00000378815 CITO14578 2027 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 INCA1Q0VD86 236 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 ZNF211Q13398 564 aaPredicted RBP16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 CLUL1Q15846 466 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 ELOVL4Q9GZR5 314 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 SCINQ9Y6U3 715 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 MYO1FO00160 1098 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 MED7O43513 233 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 CD19P15391 556 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 ELNP15502 786 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 AKAP5P24588 427 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 SLC1A1P43005 524 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 XKR4Q5GH76 650 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 KLHL7Q8IXQ5 586 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms