RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 DNAJC8O75937 253 aaPredicted RBP20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 ATG7O95352 703 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 TNFSF9P41273 254 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 CAPSQ13938 189 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 SLFN12LQ6IEE8 588 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 SEPT14Q6ZU15 432 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 KCNN1Q92952 543 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 NSRP1Q9H0G5 558 aaKnown RBP20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 ABCF3Q9NUQ8 709 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 FGFR1OP2Q9NVK5 253 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 TBK1Q9UHD2 729 aa20.69■□□□□ 0.9
SHROOM1-202ENST00000378676 TCP11X1B4DZS4 312 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 TBXAS1P24557 533 aaPredicted RBP20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 RPS12P25398 132 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 ZNF132P52740 706 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 XRCC4Q13426 336 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 FAM212AQ96EL1 285 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 KCNK9Q9NPC2 374 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 SNX3O60493 162 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 P3H1Q32P28 736 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 KAZNQ674X7 775 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 HIBCHQ6NVY1 386 aaPredicted RBP20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 TAX1BP1Q86VP1 789 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 CCDC89Q8N998 374 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 ZNF606Q8WXB4 792 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 UPF1Q92900 1129 aaKnown RBP eCLIP20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 PCYT2Q99447 389 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 SLC12A4Q9UP95 1085 aa20.68■□□□□ 0.9
SHROOM1-202ENST00000378676 TCEA3O75764 348 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 LDHAP00338 332 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 CST3P01034 146 aaPredicted RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 POTEJP0CG39 1038 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 ATP5DP30049 168 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 NFX1Q12986 1120 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 GDAP1Q8TB36 358 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 SLC7A3Q8WY07 619 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 SLITRK1Q96PX8 696 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 FHDC1Q9C0D6 1143 aaPredicted RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 PARVAQ9NVD7 372 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 LGALS13Q9UHV8 139 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 BRAFP15056 766 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 MMP8P22894 467 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 OGDHQ02218 1023 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 DALRD3Q5D0E6 543 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 MFSD7Q6UXD7 560 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 GSTA5Q7RTV2 222 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 ACSF2Q96CM8 615 aaPredicted RBP20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 SGSM3Q96HU1 749 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 DNPEPQ9ULA0 475 aa20.67■□□□□ 0.9
SHROOM1-202ENST00000378676 LIASO43766 372 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 KRT1P04264 644 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ZSCAN5DPP0CG00 497 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 BRD2P25440 801 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ICAM3P32942 547 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 GSCP56915 257 aaPredicted RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ADCY1Q08828 1119 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 STXBP2Q15833 593 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 TXNRD3NBQ6F5E7 133 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 TRPM8Q7Z2W7 1104 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 NIFKQ9BYG3 293 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 EURLQ9NYK6 297 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 IP6K2Q9UHH9 426 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 KCNG1Q9UIX4 513 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 SSC5DA1L4H1 1573 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 IGKV6D-21A0A0A0MT36 114 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 GSTTP1A0A1W2PQM5 241 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 TCRBV5S1A1TA0A578 114 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 TMEM191CA6NGB0 347 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 TMEM191BP0C7N4 346 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ETS1P14921 441 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ATF7P17544 494 aaPredicted RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 ZBTB33Q86T24 672 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 BRSK2Q8IWQ3 736 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 BBOF1Q8ND07 529 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 MCEEQ96PE7 176 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 GGT7Q9UJ14 662 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-202ENST00000378676 FAM189A1O60320 539 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 FAM133BQ5BKY9 247 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 TMEM63BQ5T3F8 832 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 CYP4F22Q6NT55 531 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 FAM228AQ86W67 206 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 PARP9Q8IXQ6 854 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 SRRM1Q8IYB3 904 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 ZCCHC9Q8N567 271 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 CKAP2Q8WWK9 683 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 RBM15Q96T37 977 aaKnown RBP eCLIP20.65■□□□□ 0.97e-7■■■□□ 17.3
SHROOM1-202ENST00000378676 SGIP1Q9BQI5 828 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 MTMR12Q9C0I1 747 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 IVNS1ABPQ9Y6Y0 642 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 C19orf81C9J6K1 198 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 F8VP50 259 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 ASS1P00966 412 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 TARBP2Q15633 366 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 ZNF394Q53GI3 561 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 ANGEL2Q5VTE6 544 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms