RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 ADGRB2O60241 1585 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SYCE1LA8MT33 242 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 RAD51CO43502 376 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 TLR2O60603 784 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 MCF2P10911 925 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 GNL1P36915 607 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SNX17Q15036 470 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 RBBP7Q16576 425 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 COBLL1Q53SF7 1204 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SLC7A14Q8TBB6 771 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 MTBPQ96DY7 904 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SPATA17Q96L03 361 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 ERP44Q9BS26 406 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 TRIM45Q9H8W5 580 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 POLLQ9UGP5 575 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 USP10Q14694 798 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 KIRREL3Q8IZU9 778 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 USP38Q8NB14 1042 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 UBA3Q8TBC4 463 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SNX5Q9Y5X3 404 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 SLC30A1Q9Y6M5 507 aa18.64■□□□□ 0.57
CNTNAP3-204ENST00000377656 HIST1H2AGP0C0S8 130 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 KRT4P19013 534 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 HIST1H2ADP20671 130 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PNPLA4P41247 253 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 HIST1H2AHQ96KK5 128 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CEP19Q96LK0 163 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PRMT1Q99873 361 aaKnown RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 HIST1H2AJQ99878 128 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 H2AFJQ9BTM1 129 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 TEX12Q9BXU0 123 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 L2HGDHQ9H9P8 463 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 GPBP1L1Q9HC44 474 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 SMARCAL1Q9NZC9 954 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CHMP2BQ9UQN3 213 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 KCNJ1P48048 391 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 IL31Q6EBC2 164 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 RUSC1Q9BVN2 902 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 ARHGEF38Q9NXL2 777 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CCDC78A2IDD5 438 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 UPP2O95045 317 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 TAF6P49848 677 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 STX3Q13277 289 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PDAP1Q13442 181 aaKnown RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CUL3Q13618 768 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 YAF2Q8IY57 180 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PPP2R3CQ969Q6 453 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PPP1R2P1Q96PQ5 205 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 SEPT5Q99719 369 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CARD9Q9H257 536 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 ST8SIA6P61647 398 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 KYNUQ16719 465 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 BOLA3Q53S33 107 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 RABGAP1LQ5R372 815 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 CDR2LQ86X02 465 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 ARL8AQ96BM9 186 aa18.63■□□□□ 0.57
CNTNAP3-204ENST00000377656 PRRG1O14668 218 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 NDUFS3O75489 264 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 GJB7Q6PEY0 223 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 CATSPERBQ9H7T0 1116 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 PCDHB8Q9UN66 801 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 FAM47DPA6NHR8 397 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 OGTO15294 1046 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 NPTXRO95502 500 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 GYS1P13807 737 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 BRD2P25440 801 aaKnown RBP18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MAGEA4P43358 317 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 CENPCQ03188 943 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MFN1Q8IWA4 741 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 TSSK1BQ9BXA7 367 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 UBQLN1Q9UMX0 589 aaKnown RBP18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MTSS1O43312 755 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 CHN1P15882 459 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MUTP22033 750 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 HMOX2P30519 316 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 SPRP35270 261 aaPredicted RBP18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 CPT1AP50416 773 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 SMTNL2Q2TAL5 461 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 GOLGA7BQ2TAP0 167 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MGAT5BQ3V5L5 792 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 FAM118BQ9BPY3 351 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 DBR1Q9UK59 544 aaKnown RBP18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 MED24O75448 989 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 ITGB3P05106 788 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 SREBF1P36956 1147 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 OR1G1P47890 313 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 C3orf62Q6ZUJ4 267 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 STKLD1Q8NE28 680 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 RANBP17Q9H2T7 1088 aaKnown RBP18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 KDM4CQ9H3R0 1056 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 NAGPAQ9UK23 515 aa18.62■□□□□ 0.57
CNTNAP3-204ENST00000377656 CYP2C8P10632 490 aa18.61■□□□□ 0.57
CNTNAP3-204ENST00000377656 CUL2Q13617 745 aa18.61■□□□□ 0.57
CNTNAP3-204ENST00000377656 TRIM65Q6PJ69 517 aa18.61■□□□□ 0.57
CNTNAP3-204ENST00000377656 EPN3Q9H201 632 aa18.61■□□□□ 0.57
CNTNAP3-204ENST00000377656 UBE2Q2LH0YL09 131 aa18.61■□□□□ 0.57
CNTNAP3-204ENST00000377656 FAM200BP0CF97 657 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms