RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SNTG2	Q9NY99	539 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	KLK14	Q9P0G3	267 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CDC23	Q9UJX2	597 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CPSF3	Q9UKF6	684 aa	Known RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	FANCG	O15287	622 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	TSPAN1	O60635	241 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	ITGB3	P05106	788 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	EIF4B	P23588	611 aa	Known RBP	12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	PRKCI	P41743	596 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	HDX	Q7Z353	690 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	BLOC1S6	Q9UL45	172 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	ASGR1	P07306	291 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	NFIC	P08651	508 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	CUL2	Q13617	745 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	ASTE1	Q2TB18	679 aa	Predicted RBP	12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	C10orf76	Q5T2E6	689 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	JADE1	Q6IE81	842 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	DPY19L2P1	Q6NXN4	242 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	LNX1	Q8TBB1	728 aa	Predicted RBP	12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	HELQ	Q8TDG4	1101 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	TAS2R14	Q9NYV8	317 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	HYOU1	Q9Y4L1	999 aa		12.44	□□□□□ -0.42
LMO7-204	ENST00000377499	CTAGE15	A4D2H0	777 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CTAGE8	P0CG41	777 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	MCF2	P10911	925 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	AKAP5	P24588	427 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	VEGFB	P49765	207 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CDC42EP1	Q00587	391 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	TMEM132D	Q14C87	1099 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	KCNA10	Q16322	511 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	ZNF667	Q5HYK9	610 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	NOTUM	Q6P988	496 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CTAGE6	Q86UF2	777 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CTAGE4	Q8IX94	777 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	DDX20	Q9UHI6	824 aa	Known RBP	12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	AGAP1	Q9UPQ3	857 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	NUB1	Q9Y5A7	615 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	UMODL1	Q5DID0	1318 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	SMIM35	A0A1B0GVV1	85 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	RTN2	O75298	545 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CYP11B1	P15538	503 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	AP3M2	P53677	418 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	SGSM1	Q2NKQ1	1148 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	ENOSF1	Q7L5Y1	443 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	NOP9	Q86U38	636 aa	Known RBP	12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	PALB2	Q86YC2	1186 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	TMEM130	Q8N3G9	435 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	GPR161	Q8N6U8	529 aa	Known RBP	12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	KLC4	Q9NSK0	619 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	SALL4	Q9UJQ4	1053 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	COQ4	Q9Y3A0	265 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CNTNAP2	Q9UHC6	1331 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	IL18RAP	O95256	599 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	VNN1	O95497	513 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	THPO	P40225	353 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	ZFYVE27	Q5T4F4	411 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	PEX26	Q7Z412	305 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	CEP112	Q8N8E3	955 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	GPR88	Q9GZN0	384 aa		12.43	□□□□□ -0.42
LMO7-204	ENST00000377499	ZNF185	O15231	689 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ATMIN	O43313	823 aa	Predicted RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RNF40	O75150	1001 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	CYBA	P13498	195 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	TBXAS1	P24557	533 aa	Predicted RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	GNA15	P30679	374 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	PAFAH1B1	P43034	410 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	BPIFB4	P59827	614 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ORC1	Q13415	861 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	C2CD6	Q53TS8	623 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RNF180	Q86T96	592 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	SHC3	Q92529	594 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ZNF653	Q96CK0	615 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RSRC1	Q96IZ7	334 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	FAM81B	Q96LP2	452 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	THAP2	Q9H0W7	228 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	SRRD	Q9UH36	339 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ARID2	Q68CP9	1835 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ATP6V1G1	O75348	118 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	POLR2B	P30876	1174 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	FAM71A	Q8IYT1	594 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	PHC3	Q8NDX5	983 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	CPA5	Q8WXQ8	436 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	TACO1	Q9BSH4	297 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	EIF2A	Q9BY44	585 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	APOBEC3G	Q9HC16	384 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499		Q9Y3F1	56 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	TRIM17	Q9Y577	477 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	PCDHGA4	Q9Y5G9	962 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	KPNA6	O60684	536 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RPS6KA5	O75582	802 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	DARS	P14868	501 aa	Known RBP	12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	RAP1GAP	P47736	663 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	GCNT1	Q02742	428 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	ARHGEF6	Q15052	776 aa		12.42	□□□□□ -0.42
LMO7-204	ENST00000377499	SCARA3	Q6AZY7	606 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms